Regulog Rex - Lactobacillaceae

Properties
Regulator type:	Transcription factor
Regulator family:	Rex
Regulation mode:	repressor
Biological process:	Energy metabolism
Effector:	NADH
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 68 sites [see more]

Member of regulog collections

By taxonomy - Lactobacillaceae
By trascription factor - Rex
By TF family - Rex
By effector - NADH
By pathway - Energy metabolism

Statistics of regulated genes
Genome	Genes	Operons
Lactobacillus acidophilus NCFM	3	3
Lactobacillus brevis ATCC 367	6	6
Lactobacillus casei ATCC 334	3	3
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	2	2
Lactobacillus fermentum IFO 3956	4	4
Lactobacillus helveticus DPC 4571	2	2
Lactobacillus johnsonii NCC 533	2	2
Lactobacillus plantarum WCFS1	3	3
Lactobacillus reuteri JCM 1112	5	5
Lactobacillus rhamnosus GG	3	3
Lactobacillus sakei subsp. sakei 23K	6	6
Lactobacillus salivarius subsp. salivarius UCC118	3	3
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	5	5
Oenococcus oeni PSU-1	3	3
Pediococcus pentosaceus ATCC 25745	5	3

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
rex	Lactobacillus acidophilus NCFM Gene: LBA0398: Redox-sensitive transcriptional regulator Rex	* Lactobacillus brevis ATCC 367 Site: position = -137 score = 4.42556 sequence = TTGCAAATTCTTTCACAA Gene: LVIS_0616: Redox-sensitive transcriptional regulator Rex	Lactobacillus casei ATCC 334 Gene: LSEI_2245: Redox-sensitive transcriptional regulator Rex	* Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -141 score = 4.9145 sequence = TTGTGAAAAAGTTCAATA Gene: LBUL_1498: Redox-sensitive transcriptional regulator Rex	Lactobacillus fermentum IFO 3956 Gene: LAF_0324: Redox-sensitive transcriptional regulator Rex	Lactobacillus helveticus DPC 4571 Gene: lhv_0416: Redox-sensitive transcriptional regulator Rex	Lactobacillus johnsonii NCC 533 Gene: LJ0455: Redox-sensitive transcriptional regulator Rex	Lactobacillus plantarum WCFS1 Gene: lp_0725: Redox-sensitive transcriptional regulator Rex	* Lactobacillus reuteri JCM 1112 Site: position = -157 score = 4.6717 sequence = TTGTATTTTAGTTCACAA Gene: LAR_0341: Redox-sensitive transcriptional regulator Rex	Lactobacillus rhamnosus GG Gene: LGG_02247: Redox-sensitive transcriptional regulator Rex	Lactobacillus sakei subsp. sakei 23K Gene: LSA0356: Redox-sensitive transcriptional regulator Rex	* Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -33 score = 4.96166 sequence = ATGTTAAATATTTCACGA Gene: LSL_1214: Redox-sensitive transcriptional regulator Rex	* Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -39 score = 4.86073 sequence = TTATGCAAAAGTTCACAA Gene: LEUM_1774: Redox-sensitive transcriptional regulator Rex	Oenococcus oeni PSU-1 Gene: OEOE_1398: Redox-sensitive transcriptional regulator Rex	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_1470: Redox-sensitive transcriptional regulator Rex	Redox-sensitive transcriptional regulator Rex

CRON 2.
ackA	* Lactobacillus acidophilus NCFM Site: position = -41 score = 5.42199 sequence = TTGTGAAATATATAACTA Gene: LBA0463: Acetate kinase (EC 2.7.2.1)	Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	* Lactobacillus helveticus DPC 4571 Site: position = -38 score = 5.47691 sequence = TTGTGAAAAATATAACTA Gene: lhv_0497: Acetate kinase (EC 2.7.2.1)	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1	Lactobacillus reuteri JCM 1112	Lactobacillus rhamnosus GG	Lactobacillus sakei subsp. sakei 23K	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745	Acetate kinase (EC 2.7.2.1)

CRON 3.
adhE	* Lactobacillus acidophilus NCFM Site: position = -45 score = 5.4652 sequence = TTGTAAATTAGTTCACAA Gene: LBA0461: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Lactobacillus brevis ATCC 367 Site: position = -105 score = 4.98144 sequence = TTGTGATTTTTTTAACAT Site: position = -47 score = 4.82127 sequence = TCGTGAAGAAGTTAACAA Gene: LVIS_0119: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Lactobacillus casei ATCC 334 Site: position = -85 score = 4.70114 sequence = TTGTTTACAAAATCACAA Site: position = -106 score = 4.97419 sequence = TCGTGAAAAAATTCACCA Site: position = -49 score = 5.37516 sequence = TTGTGAAATGGTTAACAA Gene: LSEI_0775: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -47 score = 5.23577 sequence = TTGAGAAATTGATCACAA Gene: LBUL_1581: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Lactobacillus fermentum IFO 3956 Site: position = -151 score = 4.88131 sequence = TTGAAATTTAATTCACAA Site: position = -85 score = 4.45918 sequence = TTGTTGACTAAATCACAA Gene: LAF_0277: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	Lactobacillus helveticus DPC 4571	* Lactobacillus johnsonii NCC 533 Site: position = -289 score = 4.84916 sequence = TTATTAAAATTTTAACAT Site: position = -191 score = 5.26077 sequence = TTGTGAAATATTTTTCAA Site: position = -104 score = 5.03809 sequence = TTGTAAAAAGATGCACAA Gene: LJ1766: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Lactobacillus plantarum WCFS1 Site: position = -43 score = 5.54642 sequence = TTGTAAATTAATTCACAA Gene: lp_3662: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Lactobacillus reuteri JCM 1112 Site: position = -238 score = 4.3935 sequence = TTGTGAAATAGACTTCAA Site: position = -104 score = 5.12861 sequence = TTGTTTAAATGTTCACAA Gene: LAR_0310: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Lactobacillus rhamnosus GG Site: position = -105 score = 5.15524 sequence = TCGTGAAAAAGTTCACTA Site: position = -84 score = 4.70114 sequence = TTGTTTACAAAATCACAA Site: position = -48 score = 5.37516 sequence = TTGTGAAATGGTTAACAA Gene: LGG_00757: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Lactobacillus sakei subsp. sakei 23K Site: position = -99 score = 5.12508 sequence = CTGTTAAAAAAATCACAA Site: position = -42 score = 5.19972 sequence = TTGTTAATTAAATCACAT Gene: LSA0379: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -99 score = 5.38535 sequence = TTGTGAATTAATTCACGA Gene: LSL_1901: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -35 score = 4.69848 sequence = TTGTTAATAAATGAGCAA Site: position = -156 score = 4.55084 sequence = ATGTGATTTATTATACAA Gene: LEUM_0146: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	* Oenococcus oeni PSU-1 Site: position = -107 score = 4.61007 sequence = TAGTGATTTTTTTTACAA Site: position = -49 score = 5.61882 sequence = TTGTTAATAAGTTCACAA Gene: OEOE_1248: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)	Pediococcus pentosaceus ATCC 25745	Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)

CRON 4.
noxE	Lactobacillus acidophilus NCFM	* Lactobacillus brevis ATCC 367 Site: position = -44 score = 5.3697 sequence = TTGTGAAAATTATCTCAA Gene: LVIS_1558: NADH oxidase (EC 1.6.99.3)	* Lactobacillus casei ATCC 334 Site: position = -40 score = 5.03825 sequence = TTGTGAAAAGGTTATCAA Site: position = -109 score = 4.96503 sequence = TTAATAAATATTTCACAA Gene: LSEI_0285: NADH oxidase (EC 1.6.99.3)	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	* Lactobacillus plantarum WCFS1 Site: position = -36 score = 4.9981 sequence = TTGTGAATATAAACACAT Gene: lp_3449: NADH oxidase (EC 1.6.99.3)	* Lactobacillus reuteri JCM 1112 Site: position = -245 score = 5.07227 sequence = TTGTGAGTAATTTTACAA Site: position = -35 score = 4.55786 sequence = TTGTGAAAATCAGAACAT Gene: LAR_0064: NADH oxidase (EC 1.6.99.3)	* Lactobacillus rhamnosus GG Site: position = -41 score = 5.31613 sequence = TTGTGAAATTTTTATCAA Gene: LGG_00325: NADH oxidase (EC 1.6.99.3)	* Lactobacillus sakei subsp. sakei 23K Site: position = -193 score = 4.66911 sequence = TTTATAATAAAATCACAA Gene: LSA0802: NADH oxidase (EC 1.6.99.3)	Lactobacillus salivarius subsp. salivarius UCC118	* Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -114 score = 4.62008 sequence = TCGTGTTAAATATCACAA Gene: LEUM_2067: NADH oxidase (EC 1.6.99.3)	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0285: NADH oxidase (EC 1.6.99.3)	NADH oxidase (EC 1.6.99.3)

CRON 5.
ldh	* Lactobacillus acidophilus NCFM Site: position = -40 score = 5.35145 sequence = TTGTTAAAATTATCACTA Gene: LBA0271: L-lactate dehydrogenase (EC 1.1.1.27)	Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334 Gene: LSEI_2549: L-lactate dehydrogenase (EC 1.1.1.27)	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	* Lactobacillus helveticus DPC 4571 Site: position = -39 score = 5.35145 sequence = TTGTTAAAATTATCACTA Gene: lhv_0289: L-lactate dehydrogenase (EC 1.1.1.27)	* Lactobacillus johnsonii NCC 533 Site: position = -40 score = 5.36102 sequence = TTGTTAAATAAATCACTA Gene: LJ0274: L-lactate dehydrogenase (EC 1.1.1.27)	Lactobacillus plantarum WCFS1	Lactobacillus reuteri JCM 1112	Lactobacillus rhamnosus GG Gene: LGG_02523: L-lactate dehydrogenase (EC 1.1.1.27)	* Lactobacillus sakei subsp. sakei 23K Site: position = -97 score = 4.89584 sequence = TTCTGAAAATTTAAACAA Gene: LSA1606: L-lactate dehydrogenase (EC 1.1.1.27)	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745	L-lactate dehydrogenase (EC 1.1.1.27)

CRON 6.
dhaT	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367 Gene: LVIS_2191: 1,3-propanediol dehydrogenase (EC 1.1.1.202)	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956 Gene: LAF_0741: 1,3-propanediol dehydrogenase (EC 1.1.1.202)	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	* Lactobacillus plantarum WCFS1 Site: position = -116 score = 4.98483 sequence = TTGTGAAAAATATAATTA Gene: lp_3051: 1,3-propanediol dehydrogenase (EC 1.1.1.202)	* Lactobacillus reuteri JCM 1112 Site: position = -164 score = 5.19416 sequence = TTGTGAATATTATGACAA Gene: LAR_0029: 1,3-propanediol dehydrogenase (EC 1.1.1.202)	Lactobacillus rhamnosus GG	* Lactobacillus sakei subsp. sakei 23K Site: position = -35 score = 5.32166 sequence = TTGTGAAATAATTCAGAA Gene: LSA0122: 1,3-propanediol dehydrogenase (EC 1.1.1.202)	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1 Gene: OEOE_1336: 1,3-propanediol dehydrogenase (EC 1.1.1.202)	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0276: 1,3-propanediol dehydrogenase (EC 1.1.1.202)	1,3-propanediol dehydrogenase (EC 1.1.1.202)

CRON 7.
adhB1	Lactobacillus acidophilus NCFM	2 Lactobacillus brevis ATCC 367* Site: position = -79 score = 4.80594 sequence = TTGTGCAAAATTTCACTT Gene: LVIS_1019: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent Gene: LVIS_0254: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956 Gene: LAF_1528: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1	Lactobacillus reuteri JCM 1112 Gene: LAR_1406: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus rhamnosus GG	* Lactobacillus sakei subsp. sakei 23K Site: position = -73 score = 5.33393 sequence = TTGTGAAAAAAATCATAA Gene: LSA1702: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus salivarius subsp. salivarius UCC118	* Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -36 score = 5.18733 sequence = TTGTAAATAAGTTCACAT Gene: LEUM_1919: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	* Oenococcus oeni PSU-1 Site: position = -176 score = 4.88542 sequence = TTGTAAATTTTTGTACAA Gene: OEOE_0527: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Pediococcus pentosaceus ATCC 25745	Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent

CRON 8.
gldA	Lactobacillus acidophilus NCFM	* Lactobacillus brevis ATCC 367 Site: position = -37 score = 5.32954 sequence = TTGTGAAAATAATCACGA Gene: LVIS_2165: Glycerol dehydrogenase (EC 1.1.1.6)	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	* Lactobacillus fermentum IFO 3956 Site: position = -39 score = 5.00486 sequence = TTGTTAAAACATACACAA Gene: LAF_0639: Glycerol dehydrogenase (EC 1.1.1.6)	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1	* Lactobacillus reuteri JCM 1112 Site: position = -38 score = 4.84808 sequence = TTGTTAACTTATACACAA Gene: LAR_1724: Glycerol dehydrogenase (EC 1.1.1.6)	Lactobacillus rhamnosus GG	Lactobacillus sakei subsp. sakei 23K	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745	Glycerol dehydrogenase (EC 1.1.1.6)

CRON 9.
adhB2	Lactobacillus acidophilus NCFM	* Lactobacillus brevis ATCC 367 Site: position = -36 score = 5.16615 sequence = TTGTGAATATTATATCAA Gene: LVIS_0911: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956 Gene: LAF_0797: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1 Gene: lp_3054: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus reuteri JCM 1112 Gene: LAR_1480: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus rhamnosus GG Gene: LGG_02693: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus sakei subsp. sakei 23K	* Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -64 score = 5.09986 sequence = TTGAGAAAGAATTCACAA Gene: LSL_1748: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0182: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent

CRON 10.
PF02525	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1	Lactobacillus reuteri JCM 1112	Lactobacillus rhamnosus GG	Lactobacillus sakei subsp. sakei 23K	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1 Gene: OEOE_0727: Putative NAD(P)H-quinone dehydrogenase	* Pediococcus pentosaceus ATCC 25745 Site: position = -2 score = 5.28012 sequence = TTATGAAAAAAATAACAA Gene: PEPE_1047: Putative NAD(P)H-quinone dehydrogenase	Putative NAD(P)H-quinone dehydrogenase

CRON 11.
adhB	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	2 Lactobacillus fermentum IFO 3956* Site: position = -89 score = 5.20423 sequence = ATGTTAAAAAGTTAACAA Site: position = -201 score = 4.48847 sequence = TTGTAGAAAAATTCACCA Gene: LAF_1372: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent Gene: LAF_0972: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1	Lactobacillus reuteri JCM 1112	Lactobacillus rhamnosus GG	Lactobacillus sakei subsp. sakei 23K	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745	Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent

CRON 12.
butA	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367 Gene: LVIS_0187: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	* Lactobacillus fermentum IFO 3956 Site: position = -78 score = 4.19376 sequence = TTGTGAAGTCTGTTACAA Gene: LAF_1480: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1	Lactobacillus reuteri JCM 1112 Gene: LAR_1360: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)	Lactobacillus rhamnosus GG	Lactobacillus sakei subsp. sakei 23K Gene: LSA0292: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)	Lactobacillus salivarius subsp. salivarius UCC118	* Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -17 score = 4.37291 sequence = TTGTGAGGAAAAAAACAA Gene: LEUM_0145: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)	* Oenococcus oeni PSU-1 Site: position = -48 score = 5.25888 sequence = TTGTGATTTATTTTACAA Gene: OEOE_0693: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0286: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)	2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4)

CRON 13.
rex2	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367	* Lactobacillus casei ATCC 334 Site: position = -39 score = 4.6184 sequence = ATGTGAAAAGAGTAACAA Gene: LSEI_1250: Redox-sensitive transcriptional regulator Rex paralog	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1	Lactobacillus reuteri JCM 1112	* Lactobacillus rhamnosus GG Site: position = -39 score = 4.76283 sequence = ATGTGAAAATGGTAACAA Gene: LGG_01260: Redox-sensitive transcriptional regulator Rex paralog	* Lactobacillus sakei subsp. sakei 23K Site: position = -77 score = 5.10834 sequence = ATATGAAAAAATTCACAA Gene: LSA0848: Redox-sensitive transcriptional regulator Rex paralog	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745	Redox-sensitive transcriptional regulator Rex paralog

CRON 14.
PEPE_0555	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1	Lactobacillus reuteri JCM 1112	Lactobacillus rhamnosus GG	Lactobacillus sakei subsp. sakei 23K	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1	* Pediococcus pentosaceus ATCC 25745 Site: position = -109 score = 5.41355 sequence = TTATGAAAATATTCACAA Gene: PEPE_0555: hypothetical protein	hypothetical protein
PEPE_0556	Lactobacillus acidophilus NCFM	Lactobacillus brevis ATCC 367	Lactobacillus casei ATCC 334	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956	Lactobacillus helveticus DPC 4571	Lactobacillus johnsonii NCC 533	Lactobacillus plantarum WCFS1	Lactobacillus reuteri JCM 1112	Lactobacillus rhamnosus GG	Lactobacillus sakei subsp. sakei 23K	Lactobacillus salivarius subsp. salivarius UCC118	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	Oenococcus oeni PSU-1	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_0556: cell surface protein precursor	cell surface protein precursor

CRON 15.
pncB	Lactobacillus acidophilus NCFM Gene: LBA0521: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus brevis ATCC 367 Gene: LVIS_0543: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus casei ATCC 334 Gene: LSEI_1806: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	Lactobacillus fermentum IFO 3956 Gene: LAF_0243: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus helveticus DPC 4571 Gene: lhv_0540: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus johnsonii NCC 533 Gene: LJ1734: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus plantarum WCFS1 Gene: lp_0565: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus reuteri JCM 1112 Gene: LAR_0272: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus rhamnosus GG Gene: LGG_01860: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus sakei subsp. sakei 23K Gene: LSA1570: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_1261: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_1540: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Oenococcus oeni PSU-1	* Pediococcus pentosaceus ATCC 25745 Site: position = -68 score = 4.43227 sequence = ATGATAAAATTAAAACAA Gene: PEPE_1525: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)	Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
nadE	Lactobacillus acidophilus NCFM Gene: LBA0522: NAD synthetase (EC 6.3.1.5)	Lactobacillus brevis ATCC 367 Gene: LVIS_0544: NAD synthetase (EC 6.3.1.5)	Lactobacillus casei ATCC 334 Gene: LSEI_1804: NAD synthetase (EC 6.3.1.5)	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Gene: LBUL_0405: NAD synthetase (EC 6.3.1.5)	Lactobacillus fermentum IFO 3956 Gene: LAF_0244: NAD synthetase (EC 6.3.1.5)	Lactobacillus helveticus DPC 4571 Gene: lhv_0541: NAD synthetase (EC 6.3.1.5)	Lactobacillus johnsonii NCC 533 Gene: LJ1733: NAD synthetase (EC 6.3.1.5)	Lactobacillus plantarum WCFS1 Gene: lp_0566: NAD synthetase (EC 6.3.1.5)	Lactobacillus reuteri JCM 1112 Gene: LAR_0273: NAD synthetase (EC 6.3.1.5)	Lactobacillus rhamnosus GG Gene: LGG_01858: NAD synthetase (EC 6.3.1.5)	Lactobacillus sakei subsp. sakei 23K Gene: LSA1569: NAD synthetase (EC 6.3.1.5)	Lactobacillus salivarius subsp. salivarius UCC118 Gene: LSL_1260: NAD synthetase (EC 6.3.1.5)	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Gene: LEUM_1541: NAD synthetase (EC 6.3.1.5)	Oenococcus oeni PSU-1 Gene: OEOE_0008: NAD synthetase (EC 6.3.1.5)	Pediococcus pentosaceus ATCC 25745 Gene: PEPE_1524: NAD synthetase (EC 6.3.1.5)	NAD synthetase (EC 6.3.1.5)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Rex - Lactobacillaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --