Regulog CcpB - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | unknown |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - LacI
- By pathway - unknown
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | ||
| Lactobacillus casei ATCC 334 | 2 | 1 |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | 2 | 1 |
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | 2 | 1 |
| Lactobacillus sakei subsp. sakei 23K | 2 | 1 |
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| ccpB |
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Gene: LSEI_2269: Sugar utilization transcriptional regulator CcpB, LacI family |
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Lactobacillus plantarum WCFS1 Site: position = -92 score = 4.9868 sequence = CTGGTACCGGTTTCAC Gene: lp_2602: Sugar utilization transcriptional regulator CcpB, LacI family |
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Gene: LGG_02273: Sugar utilization transcriptional regulator CcpB, LacI family |
Gene: LSA1554: Sugar utilization transcriptional regulator CcpB, LacI family |
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Sugar utilization transcriptional regulator CcpB, LacI family |
| ywbB |
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Lactobacillus casei ATCC 334 Site: position = -259 score = 5.98738 sequence = CTGAAACGCGTTACAG Gene: LSEI_2268: Predicted sugar phosphate hydrolase, HAD superfamily |
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Gene: lp_2601: Predicted sugar phosphate hydrolase, HAD superfamily |
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Lactobacillus rhamnosus GG Site: position = -240 score = 5.81244 sequence = CTGTAACGCGTTACAC Gene: LGG_02272: Predicted sugar phosphate hydrolase, HAD superfamily |
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Lactobacillus sakei subsp. sakei 23K Site: position = -56 score = 5.29465 sequence = CTGGGACGCGTTTCAT Gene: LSA1553: Predicted sugar phosphate hydrolase, HAD superfamily |
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Predicted sugar phosphate hydrolase, HAD superfamily |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |