Regulog CzcR2 - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | |
| Biological process: | Zinc resistance; Cobalt resistance; Cadmium resistance |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - CzrA
- By TF family - ArsR
- By pathway - Zinc resistance
- By pathway - Cobalt resistance
- By pathway - Cadmium resistance
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | 2 | 2 |
| Lactobacillus casei ATCC 334 | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | ||
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | 2 | 1 |
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 | 2 | 2 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| czcX |
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Lactobacillus rhamnosus GG Site: position = -68 score = 5.98704 sequence = TTATGTTGACATTAACATAT Gene: LGG_02417: Predicted cobalt-zinc-cadmium resistance protein |
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Predicted cobalt-zinc-cadmium resistance protein |
| czcR2 |
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Lactobacillus brevis ATCC 367 Site: position = -40 score = 5.93834 sequence = ATATGTTATCATATTCATAT Site: position = -56 score = 6.06647 sequence = ATATGTTATTTTCAACATAT Gene: LVIS_0395: Cobalt-zinc-cadmium resistance transcriptional regulator CzcR1, ArsR family |
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Gene: LGG_02418: Cobalt-zinc-cadmium resistance transcriptional regulator CzcR1, ArsR family |
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Pediococcus pentosaceus ATCC 25745 Site: position = -34 score = 6.06041 sequence = ATATGATAACATATTCATAT Gene: PEPE_0028: Cobalt-zinc-cadmium resistance transcriptional regulator CzcR1, ArsR family |
Cobalt-zinc-cadmium resistance transcriptional regulator CzcR1, ArsR family |
| CRON 2. | ||||||||||||||||
| cadD2 |
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Lactobacillus brevis ATCC 367 Site: position = 14 score = 6.06647 sequence = ATATGTTGAAAATAACATAT Site: position = -2 score = 5.93834 sequence = ATATGAATATGATAACATAT Gene: LVIS_0396: Predicted permease, cadmium resistance protein |
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Gene: LAF_0789: Predicted permease, cadmium resistance protein |
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Pediococcus pentosaceus ATCC 25745 Site: position = -51 score = 6.06041 sequence = ATATGAATATGTTATCATAT Gene: PEPE_0029: Predicted permease, cadmium resistance protein |
Predicted permease, cadmium resistance protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |