Regulon of AraR in Lactobacillus plantarum WCFS1
| Regulator type: | Transcription factor |
| TF locus tag: | lp_3558 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Regulog: | AraR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - AraR
- By TF family - GntR/Others
- By effector - Arabinose
- By pathway - Arabinose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -195
Score: 4.7 Sequence: TAATTTGTGCTGATAAAACA
Position: -166
Score: 6.5 Sequence: TGATTTATACGTATAAATAT
Locus tag: lp_3557
Name: araE Funciton: L-arabinose-proton symporter
Locus tag: lp_3556
Name: araK Funciton: Ribulokinase (EC 2.7.1.16)
Locus tag: lp_3555
Name: araD Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: lp_3554
Name: araA Funciton: L-arabinose isomerase (EC 5.3.1.4) |
|||
|
araE
|
L-arabinose-proton symporter
|
||
|
araK
|
Ribulokinase (EC 2.7.1.16)
|
||
|
araD
|
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
|
||
|
araA
|
L-arabinose isomerase (EC 5.3.1.4)
|
||
|
Position: -234
Score: 5.2 Sequence: TTATTGATGCGGATAAATTG
Locus tag: lp_3558
Name: araR Funciton: Arabinoside utilization transcriptional repressor AraR, GntR family |
|||
|
araR
|
Arabinoside utilization transcriptional repressor AraR, GntR family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |