Profile of regulator AraR in Lactobacillaceae
Properties
| Regulator family: |
GntR/Others |
| Regulation mode: |
repressor |
| Biological process: |
Arabinose utilization |
| Effector: |
Arabinose |
| Regulog: |
AraR - Lactobacillaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Lactobacillus brevis ATCC 367
|
|
LVIS_1743 |
araE |
-212 |
4.4 |
AAATTAATCCGAATAACAAA |
|
LVIS_1743 |
araE |
-183 |
6.1 |
TGATTTATGCGTACAAATAT |
|
Lactobacillus fermentum IFO 3956
|
|
LAF_1558 |
araK |
-77 |
5.9 |
TGATTTATACGGACAAAAAA |
|
LAF_1555 |
araE |
-153 |
4.4 |
ATATTGTTCAGTATAATTTA |
|
LAF_1554 |
araA |
-105 |
5.9 |
TGAATTGTACGGACAAATAT |
|
Lactobacillus plantarum WCFS1
|
|
lp_3557 |
araE |
-166 |
6.5 |
TGATTTATACGTATAAATAT |
|
lp_3558 |
araR |
-234 |
5.2 |
TTATTGATGCGGATAAATTG |
|
lp_3557 |
araE |
-195 |
4.7 |
TAATTTGTGCTGATAAAACA |
|
Lactobacillus reuteri JCM 1112
|
|
LAR_0467 |
araE |
-103 |
6.4 |
TGATTTATCCGTACAAATAT |
|
Lactobacillus sakei subsp. sakei 23K
|
|
LSA1860 |
araE |
-250 |
5.7 |
ATAATTATTCGAATAAATAA |
|
LSA1860 |
araE |
-150 |
4.6 |
ATATTGATTCGAATCAAAAA |
|
LSA1860 |
araE |
-121 |
4.7 |
TGATTTATTCGAATGAAAGT |
|
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
|
|
LEUM_0852 |
araA |
-136 |
5.7 |
TGACTTATACGGACAAATGT |
|
Oenococcus oeni PSU-1
|
|
OEOE_0227 |
araK |
-149 |
5 |
TGATTTATATGTACGAATGT |
|
OEOE_0227 |
araK |
-179 |
5 |
AAATTCATACGTAAAACTAA |
|
OEOE_0227 |
araK |
-192 |
4.5 |
TTATTTTTACAAAAAATTCA |
|
Pediococcus pentosaceus ATCC 25745
|
|
PEPE_0162 |
araE |
-121 |
4.5 |
AAATTCATCCTAACAAATTT |
|
PEPE_0162 |
araE |
-89 |
6.1 |
TGACTTGTCCGTATAAATAT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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|
