Regulon of T-box(Ile) in Lactobacillus acidophilus NCFM
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Ile-tRNA |
| Regulog: | T-box(Ile) - Lactobacillaceae |
| Under regulation: | |
| - Genes | 6 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By RNA motif - T-box
- By effector - Ile-tRNA
- By pathway - Amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -499
Score: 98.4 Sequence: AAGAACAGCTTTGAT...
Locus tag: LBA1216
Name: oppA Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) |
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oppA
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Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
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Position: -318
Score: 92.8 Sequence: TAATTTAGCTTTGAT...
Locus tag: LBA1347
Name: oppA Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Locus tag: LBA1346
Name: oppA Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
Locus tag: LBA1345
Name: oppA Funciton: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) |
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oppA
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Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
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oppA
|
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
|
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oppA
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Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
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Position: -313
Score: 99.9 Sequence: TGAAAACAAAAAGAA...
Locus tag: LBA1036
Name: brnQ Funciton: Branched-chain amino acid transport system carrier protein |
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brnQ
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Branched-chain amino acid transport system carrier protein
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Position: -228
Score: 62.3 Sequence: AAATAATAATTAGAT...
Locus tag: LBA0817
Name: ileS Funciton: Isoleucyl-tRNA synthetase (EC 6.1.1.5) |
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ileS
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Isoleucyl-tRNA synthetase (EC 6.1.1.5)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |