Regulon of TPP in Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Lactobacillaceae
Under regulation:
- Genes	23
- Operons	8

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -176 Score: 79.2 Sequence: CTGTCCACTAGGGGT... Locus tag: LEUM_1546 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
	LEUM_1546	tenA	Thiaminase II (EC 3.5.99.2)
Position: -234 Score: 60 Sequence: ATAAATATCTGGGGT... Locus tag: LEUM_0485 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: LEUM_0486 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: LEUM_0487 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	LEUM_0485	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	LEUM_0486	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	LEUM_0487	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -409 Score: 65.9 Sequence: ACACCAAAATCTGGG... Locus tag: LEUM_0769 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LEUM_0768 Name: null Funciton: hypothetical protein Locus tag: LEUM_0767 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LEUM_0766 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LEUM_0769	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LEUM_0768		hypothetical protein
	LEUM_0767	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LEUM_0766	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -223 Score: 64.2 Sequence: ATATGTATGTCTGGG... Locus tag: LEUM_1159 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	LEUM_1159	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Position: -213 Score: 60.5 Sequence: AATATTTTATCTGGG... Locus tag: LEUM_1545 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LEUM_1544 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: LEUM_1543 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LEUM_1545	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LEUM_1544	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	LEUM_1543	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -349 Score: 65.3 Sequence: GCTTGTGCTAGGGGC... Position: -177 Score: 79.9 Sequence: ATAATCACTAGGGGC... Locus tag: LEUM_0933 Name: null Funciton: Xanthine/uracil permease Locus tag: LEUM_0934 Name: null Funciton: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligse II Locus tag: LEUM_0935 Name: null Funciton: Acyl-CoA reductase (LuxC) Locus tag: LEUM_0936 Name: null Funciton: 3-oxoacyl-acyl carrier protein reductase Locus tag: LEUM_0937 Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter Locus tag: LEUM_0938 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
	LEUM_0933		Xanthine/uracil permease
	LEUM_0934		Acyl-CoA synthetase (AMP-forming)/AMP-acid ligse II
	LEUM_0935		Acyl-CoA reductase (LuxC)
	LEUM_0936		3-oxoacyl-acyl carrier protein reductase
	LEUM_0937	thiW	Substrate-specific component ThiW of predicted thiazole ECF transporter
	LEUM_0938	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
Position: -176 Score: 63 Sequence: TAAATAACTAGGGGC... Locus tag: LEUM_0981 Name: null Funciton: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase Locus tag: LEUM_0982 Name: null Funciton: hypothetical protein
	LEUM_0981		Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase related deacylase
	LEUM_0982		hypothetical protein
Position: -218 Score: 64.8 Sequence: ATTAACATACTAGGG... Locus tag: LEUM_1455 Name: null Funciton: Nucleoside 2-deoxyribosyltransferase Locus tag: LEUM_1454 Name: null Funciton: Thymidylate synthase Locus tag: LEUM_1453 Name: null Funciton: SAM-dependent methyltransferase
	LEUM_1455		Nucleoside 2-deoxyribosyltransferase
	LEUM_1454		Thymidylate synthase
	LEUM_1453		SAM-dependent methyltransferase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of TPP in Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --