Regulons of Oenococcus oeni PSU-1
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
AraR |
Arabinose |
Arabinose utilization |
2 |
3 |
| TF |
BirA |
Biotin |
Biotin biosynthesis |
1 |
1 |
| TF |
CcpA |
HPr, phosphocarrier protein; Fructose-1,6-bisphosphate |
Carbon catabolism |
40 |
31 |
| TF |
CcpN |
|
Gluconeogenesis |
1 |
1 |
| TF |
CopR |
Copper ion, (Cu2+) |
Copper homeostasis |
1 |
1 |
| TF |
CtsR |
Heat shock |
Heat shock response |
6 |
6 |
| TF |
FabT |
Long-chain acyl-ACP |
Fatty acid biosynthesis |
1 |
1 |
| TF |
FatR |
Oleate; Gamma-linolenic acid; Linoleate; Phytanate |
Toxic fatty acid stress response |
3 |
3 |
| TF |
FlpA |
Oxygen |
Heavy metal resistance |
2 |
2 |
| TF |
GalR |
Galactose |
Galactosides utilization; Galactose utilization |
1 |
1 |
| TF |
GlnR |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
3 |
2 |
| TF |
GntR1 |
Gluconate |
Gluconate utilization |
3 |
4 |
| TF |
HxlR |
|
Hexulose metabolism |
2 |
2 |
| TF |
LSEI_0081 |
|
Transport |
2 |
3 |
| TF |
LexA |
DNA damage |
SOS response |
9 |
6 |
| TF |
MalR3 |
Maltose |
Maltose utilization; Maltodextrin utilization |
2 |
2 |
| TF |
MleR |
L-malate |
Malate utilization |
2 |
2 |
| TF |
NagR |
N-acetylglucosamine-6-phosphate |
N-acetylglucosamine utilization |
4 |
3 |
| TF |
PurR |
5-phosphoribosyl 1-pyrophosphate |
Purine metabolism |
6 |
3 |
| TF |
RbsR |
Ribose |
Ribose utilization |
2 |
2 |
| TF |
Rex |
NADH |
Energy metabolism |
7 |
4 |
| TF |
TreR |
Trehalose-6-phosphate |
Trehalose utilization |
2 |
1 |
| TF |
YtrA |
|
Hypothetical ABC transporter |
1 |
1 |
| TF |
YxeR |
|
Antibiotic resistance |
1 |
2 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
4 |
5 |
| RNA |
FMN |
Flavin mononucleotide |
Riboflavin biosynthesis |
1 |
1 |
| RNA |
L10_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
L20_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
L21_leader |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
Lysine |
Lysine |
Lysine biosynthesis |
3 |
2 |
| RNA |
Purine |
Adenine; Guanine |
Purine metabolism |
4 |
2 |
| RNA |
S15 |
|
Ribosome biogenesis |
1 |
1 |
| RNA |
SAM |
S-adenosylmethionine |
Methionine biosynthesis |
1 |
1 |
| RNA |
T-box(Ala) |
Ala-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Gly) |
Gly-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Ile) |
Ile-tRNA |
Amino acid metabolism |
3 |
1 |
| RNA |
T-box(Leu) |
Leu-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Met) |
Met-tRNA |
Amino acid metabolism |
8 |
2 |
| RNA |
T-box(Phe) |
Phe-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Thr) |
Thr-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Tyr) |
Tyr-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
T-box(Val) |
Val-tRNA |
Amino acid metabolism |
1 |
1 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
2 |
2 |
| RNA |
yybP-ykoY |
|
|
1 |
1 |
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