Regulons of Oenococcus oeni PSU-1

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AraR	Arabinose	Arabinose utilization	2	3
TF	BirA	Biotin	Biotin biosynthesis	1	1
TF	CcpA	HPr, phosphocarrier protein; Fructose-1,6-bisphosphate	Carbon catabolism	40	31
TF	CcpN		Gluconeogenesis	1	1
TF	CopR	Copper ion, (Cu2+)	Copper homeostasis	1	1
TF	CtsR	Heat shock	Heat shock response	6	6
TF	FabT	Long-chain acyl-ACP	Fatty acid biosynthesis	1	1
TF	FatR	Oleate; Gamma-linolenic acid; Linoleate; Phytanate	Toxic fatty acid stress response	3	3
TF	FlpA	Oxygen	Heavy metal resistance	2	2
TF	GalR	Galactose	Galactosides utilization; Galactose utilization	1	1
TF	GlnR	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	3	2
TF	GntR1	Gluconate	Gluconate utilization	3	4
TF	HxlR		Hexulose metabolism	2	2
TF	LSEI_0081		Transport	2	3
TF	LexA	DNA damage	SOS response	9	6
TF	MalR3	Maltose	Maltose utilization; Maltodextrin utilization	2	2
TF	MleR	L-malate	Malate utilization	2	2
TF	NagR	N-acetylglucosamine-6-phosphate	N-acetylglucosamine utilization	4	3
TF	PurR	5-phosphoribosyl 1-pyrophosphate	Purine metabolism	6	3
TF	RbsR	Ribose	Ribose utilization	2	2
TF	Rex	NADH	Energy metabolism	7	4
TF	TreR	Trehalose-6-phosphate	Trehalose utilization	2	1
TF	YtrA		Hypothetical ABC transporter	1	1
TF	YxeR		Antibiotic resistance	1	2
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	4	5
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	L20_leader		Ribosome biogenesis	1	1
RNA	L21_leader		Ribosome biogenesis	1	1
RNA	Lysine	Lysine	Lysine biosynthesis	3	2
RNA	Purine	Adenine; Guanine	Purine metabolism	4	2
RNA	S15		Ribosome biogenesis	1	1
RNA	SAM	S-adenosylmethionine	Methionine biosynthesis	1	1
RNA	T-box(Ala)	Ala-tRNA	Amino acid metabolism	1	1
RNA	T-box(Gly)	Gly-tRNA	Amino acid metabolism	1	1
RNA	T-box(Ile)	Ile-tRNA	Amino acid metabolism	3	1
RNA	T-box(Leu)	Leu-tRNA	Amino acid metabolism	1	1
RNA	T-box(Met)	Met-tRNA	Amino acid metabolism	8	2
RNA	T-box(Phe)	Phe-tRNA	Amino acid metabolism	1	1
RNA	T-box(Thr)	Thr-tRNA	Amino acid metabolism	1	1
RNA	T-box(Tyr)	Tyr-tRNA	Amino acid metabolism	1	1
RNA	T-box(Val)	Val-tRNA	Amino acid metabolism	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	2
RNA	yybP-ykoY			1	1

	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulons of Oenococcus oeni PSU-1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --