Regulon of RbsR in Lactobacillus fermentum IFO 3956
| Regulator type: | Transcription factor |
| TF locus tag: | LAF_1343 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Ribose utilization |
| Effector: | Ribose |
| Regulog: | RbsR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - LacI
- By effector - Ribose
- By pathway - Ribose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -59
Score: 6.2 Sequence: TACGTAAAAGGTTTTAACAA
Locus tag: LAF_1738
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: LAF_1737
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: LAF_1736
Name: rbsP Funciton: Predicted ribose permease |
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rbsK
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Ribokinase (EC 2.7.1.15)
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rbsD
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D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
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rbsP
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Predicted ribose permease
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Position: -44
Score: 6 Sequence: TTAGTAAACTGTTTTATTAA
Locus tag: LAF_1343
Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family |
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rbsR
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Transcriptional repressor of ribose utilization, LacI family
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Position: -47
Score: 5 Sequence: AACGTAAAACGATTTACTGA
Locus tag: LAF_1689
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) |
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rbsK
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Ribokinase (EC 2.7.1.15)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |