Regulon of PdxR in Lactobacillus sakei subsp. sakei 23K
| Regulator type: | Transcription factor |
| TF locus tag: | LSA1351 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine biosynthesis |
| Effector: | Pyridoxal-5-phosphate |
| Regulog: | PdxR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -87
Score: 9.4 Sequence: AATTGGCTG-(10)-AAGCCAATT
Locus tag: LSA1352
Name: pdxK2 Funciton: Predicted pyridoxal kinase (EC 2.7.1.35), PF08543-family
Locus tag: LSA1353
Name: pdxU2 Funciton: Substrate-specific component PdxU2 of predicted pyridoxin-related ECF transporter
Locus tag: LSA1354
Name: COG4475 Funciton: Uncharacterized protein conserved in bacteria |
|||
|
pdxK2
|
Predicted pyridoxal kinase (EC 2.7.1.35), PF08543-family
|
||
|
pdxU2
|
Substrate-specific component PdxU2 of predicted pyridoxin-related ECF transporter
|
||
|
COG4475
|
Uncharacterized protein conserved in bacteria
|
||
|
Position: -53
Score: 9.4 Sequence: AATTGGCTT-(10)-CAGCCAATT
Locus tag: LSA1351
Name: pdxR Funciton: Putative transcritional regulator of pyridoxine metabolism, GntR family |
|||
|
pdxR
|
Putative transcritional regulator of pyridoxine metabolism, GntR family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |