Regulon of T-box(Met) in Lactobacillus acidophilus NCFM
| Regulator type: | RNA regulatory element |
| Name: | T-box |
| RFAM: | RF00230 |
| Regulation mode: | |
| Biological process: | Amino acid metabolism |
| Effector: | Met-tRNA |
| Regulog: | T-box(Met) - Lactobacillaceae |
| Under regulation: | |
| - Genes | 7 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By RNA motif - T-box
- By effector - Met-tRNA
- By pathway - Amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -270
Score: 92 Sequence: AAAAAATCTTGATGA...
Locus tag: LBA1395
Name: metQ Funciton: Methionine ABC transporter substrate-binding protein |
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metQ
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Methionine ABC transporter substrate-binding protein
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Position: -308
Score: 75.5 Sequence: AAGCGACGAAGAAAA...
Locus tag: LBA1080
Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
Locus tag: LBA1081
Name: rhc Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
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metE2
|
Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
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rhc
|
S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
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Position: -309
Score: 76.9 Sequence: ATTAAGCAATGACAA...
Locus tag: LBA1961
Name: oppA Funciton: ABC-type oligopeptide transport system, periplasmic component |
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oppA
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ABC-type oligopeptide transport system, periplasmic component
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Position: -287
Score: 91.6 Sequence: TAAACATCTTGAAGA...
Locus tag: LBA0904
Name: metQ Funciton: Methionine ABC transporter substrate-binding protein
Locus tag: LBA0905
Name: metN Funciton: Methionine ABC transporter ATP-binding protein
Locus tag: LBA0906
Name: metP Funciton: Methionine ABC transporter permease protein |
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metQ
|
Methionine ABC transporter substrate-binding protein
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metN
|
Methionine ABC transporter ATP-binding protein
|
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metP
|
Methionine ABC transporter permease protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |