Regulog LAR_1807 - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | ||
| Lactobacillus casei ATCC 334 | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | ||
| Lactobacillus reuteri JCM 1112 | 2 | 2 |
| Lactobacillus rhamnosus GG | ||
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | 2 | 2 |
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| LAR_1807 |
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Lactobacillus reuteri JCM 1112 Site: position = -35 score = 8.16829 sequence = TAATTGTAT-(3)-TTACAATAT Gene: LAR_1807: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) |
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Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -121 score = 8.50163 sequence = AAATTGTAT-(3)-ATATAATTT Gene: LEUM_1893: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) |
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Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) |
| CRON 2. | ||||||||||||||||
| LEUM_1894 |
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Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -98 score = 8.50163 sequence = AAATTATAT-(3)-ATACAATTT Gene: LEUM_1894: membrane protein, putative |
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membrane protein, putative |
| CRON 3. | ||||||||||||||||
| azlC |
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Gene: LAF_1143: Branched-chain amino acid transport protein azlC |
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Lactobacillus reuteri JCM 1112 Site: position = -91 score = 8.16829 sequence = ATATTGTAA-(3)-ATACAATTA Gene: LAR_1806: Branched-chain amino acid transport protein azlC |
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Branched-chain amino acid transport protein azlC |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |