Regulon of TPP in Pediococcus pentosaceus ATCC 25745
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Lactobacillaceae |
| Under regulation: | |
| - Genes | 8 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -185
Score: 66.6 Sequence: ATCTGCACTAGGGGT...
Locus tag: PEPE_0558
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: PEPE_0559
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: PEPE_0560
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: PEPE_0561
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) |
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
|
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
|
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
|
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tenA
|
Thiaminase II (EC 3.5.99.2)
|
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Position: -206
Score: 55 Sequence: GATTTTGTAACAGGG...
Locus tag: PEPE_0334
Name: null Funciton: hypothetical protein |
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hypothetical protein
|
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Position: -465
Score: 55 Sequence: GATTTTGTAACAGGG...
Locus tag: PEPE_0333
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: PEPE_0332
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: PEPE_0331
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component |
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thiX
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
|
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thiY
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
|
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thiZ
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |