Regulon of LexA in Lactobacillus brevis ATCC 367
| Regulator type: | Transcription factor |
| TF locus tag: | |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - LexA
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -64
Score: 4.4 Sequence: CCAAACAAACATTCGG
Locus tag: LVIS_1383
Name: uvrC Funciton: Nuclease subunit of the excinuclease complex |
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uvrC
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Nuclease subunit of the excinuclease complex
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Position: -86
Score: 4.7 Sequence: ACGAACATTTGTTCAT
Locus tag: LVIS_0763
Name: dnaE Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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dnaE
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -101
Score: 4.9 Sequence: GCGAAAGTATGTTCGG
Locus tag: LVIS_0648
Name: uvrB Funciton: Excinuclease ABC, subunit B
Locus tag: LVIS_0649
Name: uvrA Funciton: Excinuclease ABC, subunit A |
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uvrB
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Excinuclease ABC, subunit B
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uvrA
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Excinuclease ABC, subunit A
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Position: -202
Score: 4.4 Sequence: TTGAACGTGTGTTCGT
Locus tag: LVIS_2268
Name: addB Funciton: ATP-dependent nuclease, subunit B
Locus tag: LVIS_2267
Name: addA Funciton: ATP-dependent nuclease, subunit A |
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addB
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ATP-dependent nuclease, subunit B
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addA
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ATP-dependent nuclease, subunit A
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Position: -70
Score: 4.7 Sequence: TTGAACATACGTTCGG
Locus tag: LVIS_0804
Name: parE Funciton: Topoisomerase IV subunit B (EC 5.99.1.-)
Locus tag: LVIS_0805
Name: parC Funciton: Topoisomerase IV subunit A (EC 5.99.1.-) |
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parE
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Topoisomerase IV subunit B (EC 5.99.1.-)
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parC
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Topoisomerase IV subunit A (EC 5.99.1.-)
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Position: -112
Score: 4.1 Sequence: TAAAACAAATATTTTA
Position: -27
Score: 4.7 Sequence: CAGAACATACGTTTGG
Locus tag: LVIS_0812
Name: xerC Funciton: Site-specific DNA-tyrosine recombinase, XerC |
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xerC
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Site-specific DNA-tyrosine recombinase, XerC
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Position: -70
Score: 4.1 Sequence: TCGAACACGCGTTCAA
Locus tag: LVIS_1870
Name: srmB Funciton: DinG family ATP-dependent helicase
Locus tag: LVIS_1871
Name: lp_0307 Funciton: Conserved hypothetical protein
Locus tag: LVIS_1872
Name: lp_0306 Funciton: Conserved hypothetical protein |
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srmB
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DinG family ATP-dependent helicase
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lp_0307
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Conserved hypothetical protein
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lp_0306
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Conserved hypothetical protein
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Position: -49
Score: 4.2 Sequence: GCAAACGCCCGTTCGG
Locus tag: LVIS_1226
Name: dinP Funciton: DNA polymerase IV (EC 2.7.7.7)
Locus tag: LVIS_1225
Name: nrnA Funciton: 3'-to-5' oligoribonuclease A
Locus tag: LVIS_1224
Name: rheB Funciton: Putative ATP-dependent DNA/RNA helicase |
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dinP
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DNA polymerase IV (EC 2.7.7.7)
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nrnA
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3'-to-5' oligoribonuclease A
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rheB
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Putative ATP-dependent DNA/RNA helicase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |