Statistics of regulated genes

Genome	Genes	Operons
Oenococcus oeni PSU-1	1	1
Lactobacillus reuteri JCM 1112	1	1
Lactobacillus helveticus DPC 4571	1	1
Lactobacillus fermentum IFO 3956	2	2
Lactobacillus salivarius subsp. salivarius UCC118	1	1
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	1	1
Lactobacillus acidophilus NCFM	3	2
Lactobacillus johnsonii NCC 533	1	1
Lactobacillus plantarum WCFS1	2	2
Lactobacillus casei ATCC 334	2	2
Lactobacillus brevis ATCC 367	2	2
Lactobacillus sakei subsp. sakei 23K	1	1
Pediococcus pentosaceus ATCC 25745	1	1
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	1	1
Lactobacillus rhamnosus GG	2	2

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes																Function
CRON 1.
brnQ	Oenococcus oeni PSU-1	Lactobacillus reuteri JCM 1112 Gene: LAR_1569: Branched-chain amino acid transport system carrier protein	Lactobacillus helveticus DPC 4571	* Lactobacillus fermentum IFO 3956 Site: position = -329 score = 82.34 sequence = GAAACACGGTGAACA... Gene: LAF_0278: Branched-chain amino acid transport system carrier protein	Lactobacillus salivarius subsp. salivarius UCC118	Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	*2 Lactobacillus acidophilus NCFM Site: position = -300 score = 102.06 sequence = TACACACTATGAATA... Gene: LBA1222: Branched-chain amino acid transport system carrier protein Gene: LBA1224: Branched-chain amino acid transport system carrier protein	Lactobacillus johnsonii NCC 533	* Lactobacillus plantarum WCFS1 Site: position = -444 score = 99.22 sequence = TAAACGTGATGATCA... Gene: lp_0399: Branched-chain amino acid transport system carrier protein	* Lactobacillus casei ATCC 334 Site: position = -356 score = 86.33 sequence = ACTAAAAACGATGAG... Gene: LSEI_0248: Branched-chain amino acid transport system carrier protein	* Lactobacillus brevis ATCC 367 Site: position = -290 score = 78.04 sequence = TTATAAAACGTTGAA... Gene: LVIS_2119: Branched-chain amino acid transport system carrier protein	Lactobacillus sakei subsp. sakei 23K	Pediococcus pentosaceus ATCC 25745	Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	* Lactobacillus rhamnosus GG Site: position = -339 score = 85.89 sequence = TTCAAAAACGATGAG... Gene: LGG_00292: Branched-chain amino acid transport system carrier protein	Branched-chain amino acid transport system carrier protein
CRON 2.
valS	* Oenococcus oeni PSU-1 Site: position = -327 score = 68.29 sequence = ATACTAATAGTCAAC... Gene: OEOE_1392: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus reuteri JCM 1112 Site: position = -283 score = 118.28 sequence = AATAAGCATTGACCG... Gene: LAR_0490: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus helveticus DPC 4571 Site: position = -242 score = 73.55 sequence = CCAAAGCAAGAATCA... Gene: lhv_0841: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus fermentum IFO 3956 Site: position = -264 score = 119.36 sequence = TCAATGCGATGAACG... Gene: LAF_0497: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -263 score = 106.01 sequence = CATATAAGCAATGAA... Gene: LSL_1072: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 Site: position = -231 score = 63.69 sequence = ACAAAGCCAAGATCA... Gene: LBUL_0659: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus acidophilus NCFM Site: position = -246 score = 86.37 sequence = ACAAAGCCATAATCA... Gene: LBA0794: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus johnsonii NCC 533 Site: position = -250 score = 88.96 sequence = ACAAAGCAAGAATCA... Gene: LJ0958: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus plantarum WCFS1 Site: position = -287 score = 109.76 sequence = ACAACCAGCAATGAG... Gene: lp_2322: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus casei ATCC 334 Site: position = -291 score = 114.89 sequence = CTAATGCAATGATCA... Gene: LSEI_1251: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus brevis ATCC 367 Site: position = -281 score = 121.26 sequence = AAAACTAGCGTTGAA... Gene: LVIS_1253: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus sakei subsp. sakei 23K Site: position = -272 score = 101.54 sequence = ACAACGCGTTGAACA... Gene: LSA0849: Valyl-tRNA synthetase (EC 6.1.1.9)	* Pediococcus pentosaceus ATCC 25745 Site: position = -258 score = 90.45 sequence = TCTGAAGGTTATGAC... Gene: PEPE_1291: Valyl-tRNA synthetase (EC 6.1.1.9)	* Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -234 score = 76.91 sequence = AATAATCTTAGAGGA... Gene: LEUM_0322: Valyl-tRNA synthetase (EC 6.1.1.9)	* Lactobacillus rhamnosus GG Site: position = -332 score = 113.23 sequence = CTAATGCAATGATCA... Gene: LGG_01261: Valyl-tRNA synthetase (EC 6.1.1.9)	Valyl-tRNA synthetase (EC 6.1.1.9)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD