Regulon of CtsR in Lactobacillus plantarum WCFS1
| Regulator type: | Transcription factor |
| TF locus tag: | lp_1018 |
| Regulator family: | CtsR |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | CtsR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - CtsR
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -41
Score: -0.3 Sequence: ATAGTCAATATTAGTCAAAGATAA
Locus tag: lp_1018
Name: ctsR Funciton: Stress and heat shock response transcriptional regulator CtsR, CtsR family
Locus tag: lp_1019
Name: clpC Funciton: ATP-dependent Clp protease ATP-binding subunit ClpC |
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ctsR
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Stress and heat shock response transcriptional regulator CtsR, CtsR family
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clpC
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ATP-dependent Clp protease ATP-binding subunit ClpC
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Position: -93
Score: -2.3 Sequence: AAGGTCAACAAAGGTCAAAGAGCC
Locus tag: lp_1269
Name: clpE Funciton: ATP-dependent Clp protease, ATP-binding subunit ClpE |
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clpE
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ATP-dependent Clp protease, ATP-binding subunit ClpE
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Position: -91
Score: 5.9 Sequence: AATACTTTGTCTTTCCTTGACTTT
Locus tag: lp_2029
Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: lp_2028
Name: grpE Funciton: Heat shock protein GrpE
Locus tag: lp_2027
Name: dnaK Funciton: Chaperone protein DnaK
Locus tag: lp_2026
Name: dnaJ Funciton: Chaperone protein DnaJ |
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hrcA
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Heat shock response transcriptional regulator HrcA, HrcA family
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grpE
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Heat shock protein GrpE
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dnaK
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Chaperone protein DnaK
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dnaJ
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Chaperone protein DnaJ
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Position: -92
Score: 5.8 Sequence: TTTCTTTTGACCTTCACTGACCTT
Locus tag: lp_0786
Name: clpP Funciton: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) |
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clpP
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ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
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Position: -118
Score: 6.5 Sequence: AAATCCTTGACCTTGTTTGACCTT
Locus tag: lp_1903
Name: clpB Funciton: ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones |
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clpB
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ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |