Profile of regulator CtsR in Lactobacillaceae
Properties
| Regulator family: |
CtsR |
| Regulation mode: |
repressor |
| Biological process: |
Heat shock response |
| Effector: |
Heat shock |
| Regulog: |
CtsR - Lactobacillaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Lactobacillus brevis ATCC 367
|
|
LVIS_0654 |
clpP |
-90 |
6.2 |
TTTTGTTTGACCTACTCTGACCTT |
|
LVIS_1554 |
clpE |
-84 |
0.6 |
ATGGTCAAGAAAGGTCAAGCCTTT |
|
LVIS_0762 |
clpB |
-139 |
-1.6 |
TTGGTCAAAAAAGGTCAAATTATT |
|
LVIS_1701 |
ctsR |
-45 |
-1.1 |
TTAGTCAGCATTAGTCAAATAAGT |
|
Lactobacillus casei ATCC 334
|
|
LSEI_0963 |
clpP |
-85 |
7 |
AAATCTTTGACCTTATTTGACTTT |
|
LSEI_1762 |
clpE |
-198 |
0.1 |
TAGGTCAAGAAAGGTCAAACCTTT |
|
LSEI_2518 |
ctsR |
-39 |
-0 |
ATAGTCAAGATTGGTCAAAGTCAA |
|
Lactobacillus fermentum IFO 3956
|
|
LAF_0360 |
clpP |
-90 |
6.6 |
AATGATTTGACCTTTTTTGACCTA |
|
LAF_0749 |
hrcA |
-89 |
6.4 |
AGATCTTTGACTTTTGTTGACTTT |
|
LAF_1388 |
clpE |
-48 |
-0.7 |
ATGGTCAAGAAAAGTCAAAGGTTG |
|
LAF_0325 |
groS |
-153 |
-0.6 |
TTGGTCAAAATTAGTCAAAGTTTT |
|
Lactobacillus plantarum WCFS1
|
|
lp_0786 |
clpP |
-92 |
5.8 |
TTTCTTTTGACCTTCACTGACCTT |
|
lp_2029 |
hrcA |
-91 |
5.9 |
AATACTTTGTCTTTCCTTGACTTT |
|
lp_1903 |
clpB |
-118 |
6.5 |
AAATCCTTGACCTTGTTTGACCTT |
|
lp_1269 |
clpE |
-93 |
-2.3 |
AAGGTCAACAAAGGTCAAAGAGCC |
|
lp_1018 |
ctsR |
-41 |
-0.3 |
ATAGTCAATATTAGTCAAAGATAA |
|
Lactobacillus reuteri JCM 1112
|
|
LAR_0379 |
clpP |
-93 |
6.7 |
AAACATTTGACCTTTTTTGACCAA |
|
LAR_0677 |
hrcA |
-101 |
6.5 |
AATTGTTTGACGTTTCTTGACTTT |
|
LAR_1257 |
clpE |
-59 |
0.2 |
ATGGTCAAGAAAGGTCAAAACATT |
|
LAR_0342 |
groS |
-128 |
-1.1 |
ATGGTCAAAAAAAGTCAAAGTGTT |
|
Lactobacillus rhamnosus GG
|
|
LGG_00931 |
clpP |
-88 |
7 |
AAATCTTTGACCTTATTTGACTTT |
|
LGG_01367 |
clpB |
-73 |
6.2 |
AATAGTTTGACCTTAACTGACCAA |
|
LGG_01823 |
clpE |
-69 |
0.1 |
TAGGTCAAGAAAGGTCAAACCTTT |
|
LGG_02500 |
ctsR |
-39 |
-0 |
ATAGTCAAGATTGGTCAAAGTCAA |
|
Lactobacillus sakei subsp. sakei 23K
|
|
LSA0531 |
clpP |
-116 |
6 |
TACCATTTGACCATAGTTGACCTT |
|
LSA1238 |
hrcA |
-87 |
5.3 |
CAATTCTTGACTTTATTTGACGTT |
|
LSA1040 |
clpB |
-89 |
6.5 |
GAATGTTTGACCTATTTTGACTAT |
|
LSA1465 |
clpE |
-66 |
-1.8 |
AAGGTCAAAGATAGTCAAACAAAC |
|
LSA1780 |
ctsR |
-77 |
-0.8 |
ATAGTCAACGTTAGTCAAAGTTAA |
|
Lactobacillus salivarius subsp. salivarius UCC118
|
|
LSL_1168 |
clpP |
-101 |
6.3 |
TTAAATTTGACCATTATTGACCTT |
|
LSL_0386 |
clpE |
-57 |
-1.6 |
AAGGTCAAAGTTGGTCAAAATAAC |
|
LSL_0863 |
clpB |
-75 |
-1 |
AAGGTCAAACTTAGTCAAAGTTTA |
|
LSL_0195 |
ctsR |
-42 |
-1 |
AAAGTCAATGTAGGTCAAACCTAC |
|
Oenococcus oeni PSU-1
|
|
OEOE_1310 |
grpE |
-71 |
6.5 |
AAATGTTTGACCAATCTTGACTAT |
|
OEOE_1397 |
groS |
-72 |
6.7 |
AAAAGTTTGACCTTTTTTGACCAA |
|
OEOE_0570 |
clpP |
-63 |
6.7 |
AAAAGTTTGACCTTTCTTGACCAT |
|
OEOE_0289 |
hsp |
-96 |
6.5 |
TTTTATTTGACCTTTCTTGACTTT |
|
OEOE_0640 |
clpE |
-27 |
-1.3 |
AAGGTCAATAAAGGTCAAACATTG |
|
OEOE_0513 |
ctsR |
-21 |
-0.9 |
TTAGTCAGGAATGGTCAAATTATG |
|
Pediococcus pentosaceus ATCC 25745
|
|
PEPE_0455 |
clpP |
-95 |
6.9 |
AAATATTTGACCTTTTTTGACCAA |
|
PEPE_0894 |
hrcA |
-107 |
6 |
AGATGTCTGACCAAATTTGACTAT |
|
PEPE_0607 |
clpE |
-223 |
-1.5 |
ATGGTCAATATTGGTCAAACATCA |
|
PEPE_0420 |
groS |
-128 |
-0.9 |
TTGGTTAATAAAGGTCAAAAATAC |
|
PEPE_1428 |
ctsR |
-38 |
-0.6 |
ATAGTCAACATTAGTCAGAGTATA |
Export
|
Regulatory Sites
|
[ FASTA format ]
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