Regulon of PyrR in Lactobacillus reuteri JCM 1112

Properties
Regulator type:	RNA regulatory element
Name:	PyrR
RFAM:	RF00515
Regulation mode:
Biological process:	Pyrimidine metabolism
Effector:	PyrR
Regulog:	PyrR - Lactobacillaceae
Under regulation:
- Genes	10
- Operons	4

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - PyrR
By effector - PyrR
By pathway - Pyrimidine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -140 Score: 47.8 Sequence: GTTCTTTTAATGTAG... Locus tag: LAR_0247 Name: codB Funciton: Cytosine/purine/uracil/thiamine/allantoin permease family protein Locus tag: LAR_0248 Name: codA Funciton: Cytosine deaminase (EC 3.5.4.1)
	LAR_0247	codB	Cytosine/purine/uracil/thiamine/allantoin permease family protein
	LAR_0248	codA	Cytosine deaminase (EC 3.5.4.1)
Position: -292 Score: 59.6 Sequence: ATACCTTTAACTTAG... Position: -148 Score: 40 Sequence: CGACCATTTAATTGT... Locus tag: LAR_0117 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: LAR_0118 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: LAR_0119 Name: pyrD Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) Locus tag: LAR_0120 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) Locus tag: LAR_0121 Name: pyrE Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
	LAR_0117	pyrB	Aspartate carbamoyltransferase (EC 2.1.3.2)
	LAR_0118	pyrC	Dihydroorotase (EC 3.5.2.3)
	LAR_0119	pyrD	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
	LAR_0120	pyrF	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
	LAR_0121	pyrE	Orotate phosphoribosyltransferase (EC 2.4.2.10)
Position: -198 Score: 49.9 Sequence: ATTATCCTTTAATTT... Locus tag: LAR_0081 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: LAR_0080 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
	LAR_0081	carA	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
	LAR_0080	carB	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Position: -94 Score: 57.8 Sequence: AGACCTTTAATCGGA... Locus tag: LAR_0450 Name: pyrP Funciton: Xanthine/uracil permease
	LAR_0450	pyrP	Xanthine/uracil permease

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD