Regulog MleR - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | activator |
| Biological process: | Malate utilization |
| Effector: | L-malate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - LysR
- By effector - L-malate
- By pathway - Malate utilization
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | 1 | 1 |
| Lactobacillus brevis ATCC 367 | 3 | 2 |
| Lactobacillus casei ATCC 334 | 3 | 2 |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | 3 | 2 |
| Lactobacillus reuteri JCM 1112 | 2 | 2 |
| Lactobacillus rhamnosus GG | 3 | 2 |
| Lactobacillus sakei subsp. sakei 23K | 3 | 2 |
| Lactobacillus salivarius subsp. salivarius UCC118 | 3 | 2 |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | 3 | 2 |
| Oenococcus oeni PSU-1 | 3 | 2 |
| Pediococcus pentosaceus ATCC 25745 | 3 | 2 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| mleS |
*
Lactobacillus acidophilus NCFM Site: position = -363 score = 4.65449 sequence = TATTAATTTCATTTAAA Gene: LBA1075: Malolactic enzyme |
*
Lactobacillus brevis ATCC 367 Site: position = -103 score = 6.02285 sequence = TATAAAATAATTTTATA Gene: LVIS_2203: Malolactic enzyme |
*
Lactobacillus casei ATCC 334 Site: position = -389 score = 5.68157 sequence = TATAAAAATATTTTATC Gene: LSEI_0740: Malolactic enzyme |
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*
Lactobacillus plantarum WCFS1 Site: position = -138 score = 5.35247 sequence = TATTTAATATATTTATA Gene: lp_1118: Malolactic enzyme |
*
Lactobacillus reuteri JCM 1112 Site: position = -100 score = 5.65007 sequence = TATCAATTTTATTTATA Gene: LAR_1441: Malolactic enzyme |
*
Lactobacillus rhamnosus GG Site: position = -118 score = 5.68157 sequence = TATAAAAATATTTTATC Gene: LGG_00726: Malolactic enzyme |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -97 score = 5.33265 sequence = TATAAATCTATTTTATC Gene: LSA0441: Malolactic enzyme |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -107 score = 5.72838 sequence = TATAAATAATATTAATA Gene: LSL_1313: Malolactic enzyme |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -106 score = 6.02285 sequence = TATAAAATAAATTTATA Gene: LEUM_1005: Malolactic enzyme |
*
Oenococcus oeni PSU-1 Site: position = -83 score = 5.08913 sequence = TATAAGATAATTTTATC Gene: OEOE_1564: Malolactic enzyme |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -91 score = 6.00112 sequence = TATAAAAAATATTTATA Gene: PEPE_1617: Malolactic enzyme |
Malolactic enzyme |
| mleP |
|
Gene: LVIS_2202: L-malate permease |
Gene: LSEI_0741: L-malate permease |
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Gene: lp_1119: L-malate permease |
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Gene: LGG_00727: L-malate permease |
Gene: LSA0442: L-malate permease |
Gene: LSL_1312: L-malate permease |
Gene: LEUM_1006: L-malate permease |
Gene: OEOE_1563: L-malate permease |
Gene: PEPE_1616: L-malate permease |
L-malate permease |
| CRON 2. | ||||||||||||||||
| mleR |
Gene: LBA1074: Malate utilization transcrtional regulator MleR, LysR family |
*
Lactobacillus brevis ATCC 367 Site: position = -52 score = 6.02285 sequence = TATAAAATTATTTTATA Gene: LVIS_2204: Malate utilization transcrtional regulator MleR, LysR family |
*
Lactobacillus casei ATCC 334 Site: position = -76 score = 5.68157 sequence = GATAAAATATTTTTATA Gene: LSEI_0739: Malate utilization transcrtional regulator MleR, LysR family |
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Gene: LAF_1565: Malate utilization transcrtional regulator MleR, LysR family |
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*2
Lactobacillus plantarum WCFS1 Gene: lp_1115: Malate utilization transcrtional regulator MleR, LysR family Site: position = -53 score = 5.35247 sequence = TATAAATATATTAAATA Gene: lp_1116: Malate utilization transcrtional regulator MleR, LysR family |
*2
Lactobacillus reuteri JCM 1112 Site: position = -53 score = 5.65007 sequence = TATAAATAAAATTGATA Gene: LAR_1442: Malate utilization transcrtional regulator MleR, LysR family Gene: LAR_1437: Malate utilization transcrtional regulator MleR, LysR family |
*
Lactobacillus rhamnosus GG Site: position = -322 score = 5.68157 sequence = GATAAAATATTTTTATA Gene: LGG_00725: Malate utilization transcrtional regulator MleR, LysR family |
*
Lactobacillus sakei subsp. sakei 23K Site: position = -51 score = 5.33265 sequence = GATAAAATAGATTTATA Gene: LSA0440: Malate utilization transcrtional regulator MleR, LysR family |
*
Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -51 score = 5.72838 sequence = TATTAATATTATTTATA Gene: LSL_1314: Malate utilization transcrtional regulator MleR, LysR family |
*
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 Site: position = -53 score = 6.02285 sequence = TATAAATTTATTTTATA Gene: LEUM_1004: Malate utilization transcrtional regulator MleR, LysR family |
*
Oenococcus oeni PSU-1 Site: position = -16 score = 5.08913 sequence = GATAAAATTATCTTATA Gene: OEOE_1565: Malate utilization transcrtional regulator MleR, LysR family |
*
Pediococcus pentosaceus ATCC 25745 Site: position = -61 score = 6.00112 sequence = TATAAATATTTTTTATA Gene: PEPE_1618: Malate utilization transcrtional regulator MleR, LysR family |
Malate utilization transcrtional regulator MleR, LysR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |