Regulon of NagR in Pediococcus pentosaceus ATCC 25745
| Regulator type: | Transcription factor |
| TF locus tag: | PEPE_1527 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Regulog: | NagR - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - GntR/Others
- By effector - N-acetylglucosamine-6-phosphate
- By pathway - N-acetylglucosamine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -165
Score: 5.6 Sequence: TAATTGGTATATTCCATTAT
Locus tag: PEPE_0023
Name: celB2 Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69) |
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celB2
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PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
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Position: -144
Score: 5.8 Sequence: TAATAGGTATATACCAATTT
Position: -100
Score: 4.8 Sequence: AAAGCGGATTATACCAATAA
Locus tag: PEPE_1816
Name: nagE Funciton: N-acetylglucosamine and glucose PTS, EIICBA |
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nagE
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N-acetylglucosamine and glucose PTS, EIICBA
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Position: -57
Score: 5.6 Sequence: TTTTTGGTCTATACCGATAT
Locus tag: PEPE_1528
Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: PEPE_1527
Name: nagR Funciton: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family |
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nagA
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N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
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nagR
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Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
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Position: -124
Score: 5 Sequence: CATTTGATATATACCGATTT
Position: -58
Score: 4 Sequence: ATCGTTCTATATACCAATTT
Locus tag: PEPE_0478
Name: glmS Funciton: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
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glmS
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Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
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Position: -60
Score: 5.4 Sequence: ATTTTGGTTTAGACCATTTT
Position: -39
Score: 5.6 Sequence: TAATTGGACTATACCAAAAA
Locus tag: PEPE_0335
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
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nagB
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Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |