Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Lactobacillus salivarius subsp. salivarius UCC118

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
TF ArgR Arginine Arginine degradation; Arginine biosynthesis 3 3
TF BirA Biotin Biotin biosynthesis 2 1
TF CcpA HPr, phosphocarrier protein; Fructose-1,6-bisphosphate Carbon catabolism 47 41
TF CggR Fructose-1,6-bisphosphate Glycolysis 1 1
TF CopR Copper ion, (Cu2+) Copper homeostasis 2 1
TF CtsR Heat shock Heat shock response 6 4
TF FabT Long-chain acyl-ACP Fatty acid biosynthesis 2 1
TF FlpA Oxygen Heavy metal resistance 4 5
TF FruR Fructose-6-phosphate Fructose utilization 1 2
TF GalR Galactose Galactosides utilization; Galactose utilization 3 4
TF GlnR Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 5 7
TF GutR HPr, phosphocarrier protein; GutB, sorbitol-specific PTS EIIB component Sorbitol utilization 1 1
TF HrcA Heat shock Heat shock response 5 3
TF LBA0573 Multidrug resistance 1 2
TF LexA DNA damage SOS response 10 2
TF Lp_2742 Multidrug efflux; Multidrug resistance 1 1
TF MalR Maltose Maltose utilization; Maltodextrin utilization 2 1
TF MleR L-malate Malate utilization 2 2
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 1 1
TF MtlR HPr, phosphocarrier protein; MtlA, mannitol-specific enzyme IICB PTS component Mannitol utilization 2 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 5 5
TF NigR Nigerose-6-phosphate Nigerose utilization 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 2 4
TF PerR Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide Manganese homeostasis; Oxidative stress response; Iron homeostasis 6 5
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 8 4
TF Rex NADH Energy metabolism 4 3
TF RpiR Sugar utilization 3 2
TF ScrR Sucrose-6-phosphate Sucrose utilization 2 2
TF TreR Trehalose-6-phosphate Trehalose utilization 2 3
TF YwzG Transport 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 3 4
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA L10_leader Ribosome biogenesis 1 1
RNA L13_leader Ribosome biogenesis 1 1
RNA L19_leader Ribosome biogenesis 1 1
RNA L20_leader Ribosome biogenesis 1 1
RNA L21_leader Ribosome biogenesis 1 1
RNA Lysine Lysine Lysine biosynthesis 6 1
RNA PreQ1 Pre-queuosine1 Queuosine biosynthesis 2 2
RNA Purine Adenine; Guanine Purine metabolism 2 1
RNA PyrR PyrR Pyrimidine metabolism 4 3
RNA S15 Ribosome biogenesis 1 1
RNA SMK_box_riboswitch S-adenosylmethionine Methionine metabolism 1 1
RNA T-box(Ala) Ala-tRNA Amino acid metabolism 1 1
RNA T-box(Arg) Arg-tRNA Amino acid metabolism 1 1
RNA T-box(Asp) Asp-tRNA Amino acid metabolism 1 1
RNA T-box(Gly) Gly-tRNA Amino acid metabolism 1 1
RNA T-box(Ile) Ile-tRNA Amino acid metabolism 3 2
RNA T-box(Leu) Leu-tRNA Amino acid metabolism 1 1
RNA T-box(Met) Met-tRNA Amino acid metabolism 5 1
RNA T-box(Phe) Phe-tRNA Amino acid metabolism 1 1
RNA T-box(Ser) Ser-tRNA Amino acid metabolism 1 1
RNA T-box(Thr) Thr-tRNA Amino acid metabolism 1 1
RNA T-box(Trp) Trp-tRNA Amino acid metabolism 1 1
RNA T-box(Tyr) Tyr-tRNA Amino acid metabolism 3 3
RNA T-box(Val) Val-tRNA Amino acid metabolism 1 1
RNA THF Tetrahydrofolate Folate metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 1 1
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise