Regulon of TPP in Lactobacillus plantarum WCFS1

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Lactobacillaceae
Under regulation:
- Genes	7
- Operons	2

Member of regulog collections

By taxonomy - Lactobacillaceae
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -197 Score: 58.1 Sequence: TTCATAGCAACTGGG... Locus tag: lp_0219 Name: ykoE Funciton: Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: lp_0218 Name: ykoD Funciton: Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine Locus tag: lp_0217 Name: ykoC Funciton: Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	lp_0219	ykoE	Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	lp_0218	ykoD	Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
	lp_0217	ykoC	Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Position: -183 Score: 67.4 Sequence: TTAAACACTAGGGGT... Locus tag: lp_0113 Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) Locus tag: lp_0114 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: lp_0115 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: lp_0116 Name: cytX Funciton: Predicted hydroxymethylpyrimidine transporter CytX
	lp_0113	thiM	Hydroxyethylthiazole kinase (EC 2.7.1.50)
	lp_0114	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	lp_0115	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	lp_0116	cytX	Predicted hydroxymethylpyrimidine transporter CytX

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD