Regulon of HrcA in Lactobacillus sakei subsp. sakei 23K
| Regulator type: | Transcription factor |
| TF locus tag: | LSA1238 |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Regulog: | HrcA - Lactobacillaceae |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By trascription factor - HrcA
- By TF family - HrcA
- By effector - Heat shock
- By pathway - Heat shock response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -96
Score: 7.7 Sequence: TTAGCACTCGTGATAAAAGAGTGCTAA
Locus tag: LSA0050
Name: hsp Funciton: Small heat shock protein |
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hsp
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Small heat shock protein
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Position: -121
Score: 5.9 Sequence: GTGGCACTTTTCTTGCTAGAGTGCTAA
Locus tag: LSA0207
Name: clpC Funciton: ATP-dependent Clp protease ATP-binding subunit ClpA |
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clpC
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ATP-dependent Clp protease ATP-binding subunit ClpA
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Position: -41
Score: 7 Sequence: TTAGCACTCGTAATAATCAAGTGCTAA
Locus tag: LSA1238
Name: hrcA Funciton: Heat shock response transcriptional regulator HrcA, HrcA family
Locus tag: LSA1237
Name: grpE Funciton: Heat shock protein GrpE
Locus tag: LSA1236
Name: dnaK Funciton: Chaperone protein DnaK
Locus tag: LSA1235
Name: dnaJ Funciton: Chaperone protein DnaJ |
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hrcA
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Heat shock response transcriptional regulator HrcA, HrcA family
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grpE
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Heat shock protein GrpE
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dnaK
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Chaperone protein DnaK
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dnaJ
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Chaperone protein DnaJ
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Position: -55
Score: 6.8 Sequence: TTAGCACTTGAGTGTTTAGAGTGCTAA
Locus tag: LSA0358
Name: groS Funciton: Heat shock protein 60 family co-chaperone GroES
Locus tag: LSA0359
Name: groL Funciton: Heat shock protein 60 family chaperone GroEL |
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groS
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Heat shock protein 60 family co-chaperone GroES
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groL
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Heat shock protein 60 family chaperone GroEL
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |