Regulon of XylR in Lactobacillus brevis ATCC 367

Properties
Regulator type:	Transcription factor
TF locus tag:	LVIS_0464, LVIS_2109
Regulator family:	ROK
Regulation mode:	repressor
Biological process:	Xylose utilization
Effector:	Xylose
Regulog:	XylR - Lactobacillaceae
Statistics of regulated genes:
- Genes	11
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 15 sites [see more]

Member of regulog collections

By taxonomy - Lactobacillaceae
By trascription factor - XylR
By TF family - ROK
By effector - Xylose
By pathway - Xylose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -42 Score: 5.7 Sequence: GTTGGTTGTCGCAACGAACTAAC Locus tag: LVIS_0183 Name: xylA Funciton: Xylose isomerase (EC 5.3.1.5) Locus tag: LVIS_0184 Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17)
	LVIS_0183	xylA	Xylose isomerase (EC 5.3.1.5)
	LVIS_0184	xylB	Xylulose kinase (EC 2.7.1.17)
Position: -151 Score: 5.3 Sequence: GTAAATTGGTTTACTAAACCAAC Locus tag: LVIS_0463 Name: xynT Funciton: Xyloside transporter XynT Locus tag: LVIS_0464 Name: xylR Funciton: Xylose repressor XylR, ROK family
	LVIS_0463	xynT	Xyloside transporter XynT
	LVIS_0464	xylR	Xylose repressor XylR, ROK family
Position: -154 Score: 5.4 Sequence: GTTGGTTGGTTCACTGAACCATG Locus tag: LVIS_2109 Name: xylR Funciton: Xylose repressor XylR, ROK family
	LVIS_2109	xylR	Xylose repressor XylR, ROK family
Position: -90 Score: 5.1 Sequence: GTTGGTTGCTTTCGACAACTAAT Locus tag: LVIS_2287 Name: null Funciton: AraC-type DNA-binding protein Locus tag: LVIS_2286 Name: xynT2 Funciton: Xyloside transporter XynT Locus tag: LVIS_2285 Name: xynB Funciton: Beta-xylosidase
	LVIS_2287		AraC-type DNA-binding protein
	LVIS_2286	xynT2	Xyloside transporter XynT
	LVIS_2285	xynB	Beta-xylosidase
Position: -150 Score: 5.3 Sequence: GTTGGTTTAGTAAACCAATTTAC Locus tag: LVIS_0462 Name: xylS Funciton: Alpha-xylosidase (EC 3.2.1.-)
	LVIS_0462	xylS	Alpha-xylosidase (EC 3.2.1.-)
Position: -111 Score: 5.4 Sequence: CATGGTTGGTTGCGGCAATCAAC Position: -107 Score: 6.1 Sequence: GTTGGTTGCGGCAATCAACCAAC Locus tag: LVIS_0185 Name: null Funciton: hypothetical protein Locus tag: LVIS_0186 Name: xylT Funciton: D-xylose proton-symporter XylT
	LVIS_0185		hypothetical protein
	LVIS_0186	xylT	D-xylose proton-symporter XylT

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD