Profile of regulator XylR in Lactobacillaceae
Properties
| Regulator family: |
ROK |
| Regulation mode: |
repressor |
| Biological process: |
Xylose utilization |
| Effector: |
Xylose |
| Regulog: |
XylR - Lactobacillaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Lactobacillus brevis ATCC 367
|
|
LVIS_0462 |
xylS |
-150 |
5.3 |
GTTGGTTTAGTAAACCAATTTAC |
|
LVIS_0463 |
xynT |
-151 |
5.3 |
GTAAATTGGTTTACTAAACCAAC |
|
LVIS_0183 |
xylA |
-42 |
5.7 |
GTTGGTTGTCGCAACGAACTAAC |
|
LVIS_2109 |
xylR |
-154 |
5.4 |
GTTGGTTGGTTCACTGAACCATG |
|
LVIS_2287 |
null |
-90 |
5.1 |
GTTGGTTGCTTTCGACAACTAAT |
|
LVIS_0185 |
null |
-111 |
5.4 |
CATGGTTGGTTGCGGCAATCAAC |
|
LVIS_0185 |
null |
-107 |
6.1 |
GTTGGTTGCGGCAATCAACCAAC |
|
Lactobacillus fermentum IFO 3956
|
|
LAF_0402 |
xylA |
-53 |
5.1 |
GTTAGTTGTTTTAAAAAACCAAT |
|
LAF_0405 |
xynB2 |
-121 |
5.5 |
GTTTGTTTACTAAATAAACTAAC |
|
LAF_0401 |
xylT |
-90 |
5.2 |
GTTAGTTTTTATCAGCAACTAAC |
|
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
|
|
LEUM_0130 |
xylA |
-59 |
5.8 |
GTTGGTTGGTGTAACCAACTATG |
|
LEUM_0128 |
xylT |
-87 |
5.6 |
GTTAGTTGGTTGCGTAAATAAAC |
|
LEUM_0128 |
xylT |
-83 |
5.7 |
GTTGGTTGCGTAAATAAACTAAC |
|
Pediococcus pentosaceus ATCC 25745
|
|
PEPE_0184 |
xylS |
-182 |
5.1 |
GTTTGTTAGTTCTATTTACAAAC |
|
PEPE_0185 |
xynT |
-66 |
5.1 |
GTTTGTAAATAGAACTAACAAAC |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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|
