Regulog GutR - Lactobacillaceae
| Regulator type: | Transcription factor |
| Regulator family: | BglG |
| Regulation mode: | activator |
| Biological process: | Sorbitol utilization |
| Effector: | HPr, phosphocarrier protein; GutB, sorbitol-specific PTS EIIB component |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Lactobacillaceae
- By TF family - BglG
- By effector - HPr, phosphocarrier protein
- By effector - GutB, sorbitol-specific PTS EIIB component
- By pathway - Sorbitol utilization
| Genome | Genes | Operons |
|---|---|---|
| Lactobacillus acidophilus NCFM | ||
| Lactobacillus brevis ATCC 367 | ||
| Lactobacillus casei ATCC 334 | 2 | 1 |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | ||
| Lactobacillus fermentum IFO 3956 | ||
| Lactobacillus helveticus DPC 4571 | ||
| Lactobacillus johnsonii NCC 533 | ||
| Lactobacillus plantarum WCFS1 | 12 | 2 |
| Lactobacillus reuteri JCM 1112 | ||
| Lactobacillus rhamnosus GG | 6 | 1 |
| Lactobacillus sakei subsp. sakei 23K | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | 6 | 1 |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | ||
| Oenococcus oeni PSU-1 | ||
| Pediococcus pentosaceus ATCC 25745 |
| Genes | Function | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||||||
| gutF |
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Lactobacillus casei ATCC 334 Site: position = -88 score = 7.50975 sequence = TTTTCG-(8)-GGAAAA Gene: LSEI_2729: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
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*2
Lactobacillus plantarum WCFS1 Site: position = -98 score = 7.63562 sequence = TTTTCG-(9)-GGAAAT Gene: lp_3623: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) Site: position = -39 score = 7.08017 sequence = TTATCT-(9)-AGAAAT Gene: lp_3657: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
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*
Lactobacillus rhamnosus GG Site: position = -88 score = 7.30585 sequence = TTTTCA-(8)-GGAAAA Gene: LGG_02722: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
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Lactobacillus salivarius subsp. salivarius UCC118 Site: position = -98 score = 7.50975 sequence = TTTTCT-(8)-AGAAAT Gene: LSL_1894: Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
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Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) |
| gutR |
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3
Lactobacillus casei ATCC 334 Gene: LSEI_2728: Sorbitol utilization transcriptional regulator GutR, BglG family Gene: LSEI_2726: Sorbitol utilization transcriptional regulator GutR, BglG family Gene: LSEI_2725: Sorbitol utilization transcriptional regulator GutR, BglG family |
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2
Lactobacillus plantarum WCFS1 Gene: lp_3622: Sorbitol utilization transcriptional regulator GutR, BglG family Gene: lp_3656: Sorbitol utilization transcriptional regulator GutR, BglG family |
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Gene: LGG_02721: Sorbitol utilization transcriptional regulator GutR, BglG family |
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Gene: LSL_1893: Sorbitol utilization transcriptional regulator GutR, BglG family |
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Sorbitol utilization transcriptional regulator GutR, BglG family |
| gutM |
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Gene: LSEI_2724: Glucitol operon activator protein |
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2
Lactobacillus plantarum WCFS1 Gene: lp_3621: Glucitol operon activator protein Gene: lp_3655: Glucitol operon activator protein |
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Gene: LGG_02720: Glucitol operon activator protein |
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Gene: LSL_1892: Glucitol operon activator protein |
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Glucitol operon activator protein |
| gutC |
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Gene: LSEI_2723: Sorbitol-specific PTS, EIIC component (EC 2.7.1.69) |
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2
Lactobacillus plantarum WCFS1 Gene: lp_3654: Sorbitol-specific PTS, EIIC component (EC 2.7.1.69) Gene: lp_3620: Sorbitol-specific PTS, EIIC component (EC 2.7.1.69) |
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Gene: LGG_02719: Sorbitol-specific PTS, EIIC component (EC 2.7.1.69) |
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Gene: LSL_1891: Sorbitol-specific PTS, EIIC component (EC 2.7.1.69) |
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Sorbitol-specific PTS, EIIC component (EC 2.7.1.69) |
| gutB |
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Gene: LSEI_2722: Sorbitol-specific PTS, EIIB component (EC 2.7.1.69) |
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2
Lactobacillus plantarum WCFS1 Gene: lp_3653: Sorbitol-specific PTS, EIIB component (EC 2.7.1.69) Gene: lp_3619: Sorbitol-specific PTS, EIIB component (EC 2.7.1.69) |
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Gene: LGG_02718: Sorbitol-specific PTS, EIIB component (EC 2.7.1.69) |
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Gene: LSL_1890: Sorbitol-specific PTS, EIIB component (EC 2.7.1.69) |
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Sorbitol-specific PTS, EIIB component (EC 2.7.1.69) |
| gutA |
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Gene: LSEI_2721: Sorbitol-specific PTS, EIIA component (EC 2.7.1.69) |
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2
Lactobacillus plantarum WCFS1 Gene: lp_3652: Sorbitol-specific PTS, EIIA component (EC 2.7.1.69) Gene: lp_3618: Sorbitol-specific PTS, EIIA component (EC 2.7.1.69) |
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Gene: LGG_02717: Sorbitol-specific PTS, EIIA component (EC 2.7.1.69) |
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Gene: LSL_1889: Sorbitol-specific PTS, EIIA component (EC 2.7.1.69) |
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Sorbitol-specific PTS, EIIA component (EC 2.7.1.69) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |