Propagation of DeoR regulog to Lactobacillus fermentum IFO 3956
| Source regulog: | DeoR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | SorC |
| Regulation mode: | repressor |
| Biological process: | Deoxynucleoside utilization |
| Effector: | Deoxyribose-5-phosphate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus fermentum IFO 3956 |
| Orthologous TF(s) | LAF_1739 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -88
Score: 5.3 Sequence: TTGAATACGCTTTCAT
Locus tag: LAF_1739
|
||||
| LAF_1739 | -88 | 5.3 | TTGAATACGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoR | ||||
| Ortholog function: Deoxynucleoside utilization transcriptional regulator DeoR, SorC family | ||||
| Lactobacillus brevis ATCC 367 | LVIS_1592 | -19 | 5.7 | ATGAAAGGGGTTTCAT |
| Lactobacillus fermentum IFO 3956 | LAF_1739 | -88 | 5.3 | TTGAATACGCTTTCAT |
| Lactobacillus reuteri JCM 1112 | LAR_0109 | -39 | 5.6 | ATGAAAACGCATTCAA |
| Lactobacillus sakei subsp. sakei 23K | LSA0800 | -34 | 5.1 | TTGAAAGCGTTAACAA |
|
Position: -37
Score: 5.7 Sequence: ATGAAAGCGTATTCAA
Locus tag: LAF_1740
|
||||
| LAF_1740 | -37 | 5.7 | ATGAAAGCGTATTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoC | ||||
| Ortholog function: Deoxyribose-phosphate aldolase (EC 4.1.2.4) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_1595 | -19 | 5.7 | ATGAAAGGGGTTTCAT |
| Lactobacillus fermentum IFO 3956 | LAF_1740 | -37 | 5.7 | ATGAAAGCGTATTCAA |
| Lactobacillus plantarum WCFS1 | lp_0497 | -21 | 5.4 | AAGAAAGGGGTTTCAT |
| Lactobacillus reuteri JCM 1112 | LAR_0105 | -39 | 5.6 | ATGAAAACGCATTCAA |
| Lactobacillus sakei subsp. sakei 23K | LSA0795 | -34 | 5.1 | TTGAAAGCGTTAACAA |