Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Zur regulog to Oenococcus oeni PSU-1

Reference regulog properties
Source regulog: Zur - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Oenococcus oeni PSU-1
Orthologous TF(s) OEOE_1189
Regulated genes 3
Built upon 43 sites [see more]
Predicted regulatory interactions in Oenococcus oeni PSU-1
Locus tag Position Score Sequence
Position: -42
Score: 6.6
Sequence: TAAATAGTAATAATTACTTTTAA
Locus tag: OEOE_0084
OEOE_0084 -42 6.6 TAAATAGTAATAATTACTTTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lp_0947
Ortholog function: Conserved hypothetical protein
Lactobacillus casei ATCC 334 LSEI_2426 -183 6.4 CAAAACGTAATAATTACGATTTA
-40 6.9 TAAATAGTAATGATTACGAATTA
Lactobacillus plantarum WCFS1 lp_0947 -36 6.7 TAAATGGTAATAATTACTATTTA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1943 -63 5.7 TAAATCGTAATTGATATCATTTA
-42 7.3 TAAAAAGTAATGATTACTATTTA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0082 -65 6.1 TAAATAGTAATAATTACTATAAT
-43 6.7 TTAAAAGTAATTGTTACTATTTA
Oenococcus oeni PSU-1 OEOE_0084 -42 6.6 TAAATAGTAATAATTACTTTTAA
Position: -118
Score: 6
Sequence: TAACAAGTAATCATTACTAAGTA
Locus tag: OEOE_1188
OEOE_1188 -118 6 TAACAAGTAATCATTACTAAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, substrate-binding protein
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1587 -40 7 TAAAAAGTAATGATTACTATATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0803 -171 6.2 TTTAAAGTAATCATTACTTTTTG
-142 6.2 TTAATAGTAATGATTACTATAAT
Oenococcus oeni PSU-1 OEOE_1188 -118 6 TAACAAGTAATCATTACTAAGTA
-76 5.5 GTAAAAGTAATATTTACCATTAA
Position: -95
Score: 5.4
Sequence: TTAATGGTAAATATTACTTTTAC
Position: -53
Score: 6
Sequence: TACTTAGTAATGATTACTTGTTA
Locus tag: OEOE_1189
OEOE_1189 -95 5.4 TTAATGGTAAATATTACTTTTAC
-53 6 TACTTAGTAATGATTACTTGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zur
Ortholog function: Zinc homeostasis transcriptional regulator Zur, Fur family
Lactobacillus casei ATCC 334 LSEI_2025 -69 6.5 TTAATCGTAATCAATACGATTTA
Lactobacillus fermentum IFO 3956 LAF_1665 -37 5.8 AAAAACGTAATCATTACTAAAAA
Lactobacillus plantarum WCFS1 lp_0868 -56 6.9 TAAATAGTAATGATTATGATTTA
Lactobacillus rhamnosus GG LGG_02012 -70 5.4 CTAATCGTAACCAGTACGATTTG
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1450 -35 6.6 TAGAAAGTAAAGATTACTATTTA
Oenococcus oeni PSU-1 OEOE_1189 -95 5.4 TTAATGGTAAATATTACTTTTAC
-53 6 TACTTAGTAATGATTACTTGTTA
Pediococcus pentosaceus ATCC 25745 PEPE_0386 -36 7.3 TAAAACGTAATGATTACTATTTA