Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NiaR regulog to Pediococcus pentosaceus ATCC 25745

Reference regulog properties
Source regulog: NiaR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: NiaR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: Niacin
Phylum: Firmicutes
Propagated regulon:
Target genome Pediococcus pentosaceus ATCC 25745
Orthologous TF(s) PEPE_0214
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Pediococcus pentosaceus ATCC 25745
Locus tag Position Score Sequence
Position: -112
Score: 5.6
Sequence: TACAAGTGTCAAGACATTAATT
Locus tag: PEPE_0213
PEPE_0213 -112 5.6 TACAAGTGTCAAGACATTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: niaP
Ortholog function: Niacin transporter NiaP
Lactobacillus casei ATCC 334 LSEI_2277 -45 5 CTAGGGTGTCAAGACACCCTAA
Lactobacillus rhamnosus GG LGG_02281 -51 5.6 TTAGGGTGTCAAGACACCTAAT
Lactobacillus sakei subsp. sakei 23K LSA1529 -76 5.9 TTAAGGTGTGTTGACACCTGTA
Pediococcus pentosaceus ATCC 25745 PEPE_0213 -112 5.6 TACAAGTGTCAAGACATTAATT
Position: -64
Score: 5.6
Sequence: AATTAATGTCTTGACACTTGTA
Locus tag: PEPE_0214
PEPE_0214 -64 5.6 AATTAATGTCTTGACACTTGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: niaR
Ortholog function: NAD biosynthesis transcription regulator, HTH_11 family
Lactobacillus plantarum WCFS1 lp_2770 -121 5.8 TTTAGATGTCTTGACACCTATG
Pediococcus pentosaceus ATCC 25745 PEPE_0214 -64 5.6 AATTAATGTCTTGACACTTGTA