Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Pediococcus pentosaceus ATCC 25745

Type Regulator Effector Pathway Genes Sites
TF AgaR2 N-acetylgalactosamine N-acetylgalactosamine utilization 1 1
TF AguR Agmatine utilization 1 2
TF ArgR Arginine Arginine degradation; Arginine biosynthesis 4 35
TF BirA Biotin Biotin biosynthesis 1 1
TF CcpA HPr, phosphocarrier protein; Fructose-1,6-bisphosphate Carbon catabolism 44 66
TF CcpB unknown 1 1
TF CggR Fructose-1,6-bisphosphate Glycolysis 1 1
TF CopR Copper ion, (Cu2+) Copper homeostasis 1 2
TF CtsR Heat shock Heat shock response 2 2
TF CzcR2 Zinc resistance; Cobalt resistance; Cadmium resistance 2 2
TF FlpA Oxygen Heavy metal resistance 2 2
TF FruR Fructose-6-phosphate Fructose utilization 1 4
TF GalR Galactose Galactosides utilization; Galactose utilization 5 10
TF GlnR Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 1 1
TF GntR1 Gluconate Gluconate utilization 2 4
TF HrcA Heat shock Heat shock response 3 3
TF LexA DNA damage SOS response 6 6
TF Lp_2742 Multidrug efflux; Multidrug resistance 2 2
TF MalR Maltose Maltose utilization; Maltodextrin utilization 1 1
TF MleR L-malate Malate utilization 2 2
TF MurR N-acetylmuramate-6-phosphate N-acetylmuramate utilization 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 4 9
TF NiaR Niacin NAD biosynthesis 2 2
TF NihR Nickel homeostasis 2 2
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 4 5
TF PadR p-Coumaric acid; Ferulic acid Phenolic acid stress response 1 1
TF PerR Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide Manganese homeostasis; Oxidative stress response; Iron homeostasis 2 2
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 10 22
TF RbsR Ribose Ribose utilization 1 2
TF Rex NADH Energy metabolism 5 5
TF ScrR Sucrose-6-phosphate Sucrose utilization 2 4
TF TagR Tagatose-6-phosphate Tagatose utilization 2 2
TF TreR Trehalose-6-phosphate Trehalose utilization 2 4
TF XylR Xylose Xylose utilization 2 2
TF YwzG Transport 1 1
TF YxeR Antibiotic resistance 1 2
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 1 1