Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TagR regulog to Pediococcus pentosaceus ATCC 25745

Reference regulog properties
Source regulog: TagR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: Tagatose utilization
Effector: Tagatose-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Pediococcus pentosaceus ATCC 25745
Orthologous TF(s) PEPE_0140
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Pediococcus pentosaceus ATCC 25745
Locus tag Position Score Sequence
Position: -70
Score: 4.6
Sequence: TGTAAATGTTTTCA
Locus tag: PEPE_0140
PEPE_0140 -70 4.6 TGTAAATGTTTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tagR
Ortholog function: Tagatose utilization transcriptional regulator TagR, RpiR family
Lactobacillus casei ATCC 334 LSEI_2656 -27 4.8 GAAAATGCTTTTCA
Lactobacillus johnsonii NCC 533 LJ0144 -28 4.7 GGTAAAGTTTTACA
Lactobacillus rhamnosus GG LGG_02649 -50 4.8 GAAAATGCTTTTCA
Pediococcus pentosaceus ATCC 25745 PEPE_0140 -70 4.6 TGTAAATGTTTTCA
Position: -60
Score: 4.6
Sequence: TGAAAACATTTACA
Locus tag: PEPE_0141
PEPE_0141 -60 4.6 TGAAAACATTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tagK
Ortholog function: Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase
Lactobacillus casei ATCC 334 LSEI_2655 -112 4.8 TGAAAAGCATTTTC
Lactobacillus rhamnosus GG LGG_02648 -112 4.8 TGAAAAGCATTTTC
Pediococcus pentosaceus ATCC 25745 PEPE_0141 -60 4.6 TGAAAACATTTACA
© 2009-2020 RegPrecise