Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CzcR2 regulog to Pediococcus pentosaceus ATCC 25745

Reference regulog properties
Source regulog: CzcR2 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode:
Biological process: Zinc resistance; Cobalt resistance; Cadmium resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Pediococcus pentosaceus ATCC 25745
Orthologous TF(s) PEPE_0028
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Pediococcus pentosaceus ATCC 25745
Locus tag Position Score Sequence
Position: -34
Score: 6.1
Sequence: ATATGATAACATATTCATAT
Locus tag: PEPE_0028
PEPE_0028 -34 6.1 ATATGATAACATATTCATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: czcR2
Ortholog function: Cobalt-zinc-cadmium resistance transcriptional regulator CzcR1, ArsR family
Lactobacillus brevis ATCC 367 LVIS_0395 -56 6.1 ATATGTTATTTTCAACATAT
-40 5.9 ATATGTTATCATATTCATAT
Lactobacillus rhamnosus GG LGG_02418 -68 6 TTATGTTGACATTAACATAT
Pediococcus pentosaceus ATCC 25745 PEPE_0028 -34 6.1 ATATGATAACATATTCATAT
Position: -51
Score: 6.1
Sequence: ATATGAATATGTTATCATAT
Locus tag: PEPE_0029
PEPE_0029 -51 6.1 ATATGAATATGTTATCATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cadD2
Ortholog function: Predicted permease, cadmium resistance protein
Lactobacillus brevis ATCC 367 LVIS_0396 -2 5.9 ATATGAATATGATAACATAT
14 6.1 ATATGTTGAAAATAACATAT
Pediococcus pentosaceus ATCC 25745 PEPE_0029 -51 6.1 ATATGAATATGTTATCATAT