Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Pediococcus pentosaceus ATCC 25745

Reference regulog properties
Source regulog: Rex - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Pediococcus pentosaceus ATCC 25745
Orthologous TF(s) PEPE_1470
Regulated genes 5
Built upon 68 sites [see more]
Predicted regulatory interactions in Pediococcus pentosaceus ATCC 25745
Locus tag Position Score Sequence
Position: -109
Score: 5.4
Sequence: TTATGAAAATATTCACAA
Locus tag: PEPE_0555
PEPE_0555 -109 5.4 TTATGAAAATATTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: PEPE_0555
Ortholog function: hypothetical protein
Pediococcus pentosaceus ATCC 25745 PEPE_0555 -109 5.4 TTATGAAAATATTCACAA
Position: -2
Score: 5.3
Sequence: TTATGAAAAAAATAACAA
Locus tag: PEPE_1047
PEPE_1047 -2 5.3 TTATGAAAAAAATAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: PF02525
Ortholog function: Putative NAD(P)H-quinone dehydrogenase
Pediococcus pentosaceus ATCC 25745 PEPE_1047 -2 5.3 TTATGAAAAAAATAACAA
Position: -68
Score: 4.4
Sequence: ATGATAAAATTAAAACAA
Locus tag: PEPE_1525
PEPE_1525 -68 4.4 ATGATAAAATTAAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pncB
Ortholog function: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Pediococcus pentosaceus ATCC 25745 PEPE_1525 -68 4.4 ATGATAAAATTAAAACAA
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