Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PerR regulog to Pediococcus pentosaceus ATCC 25745

Reference regulog properties
Source regulog: PerR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Manganese homeostasis; Oxidative stress response; Iron homeostasis
Effector: Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide
Phylum: Firmicutes
Propagated regulon:
Target genome Pediococcus pentosaceus ATCC 25745
Orthologous TF(s) PEPE_0338, PEPE_0386
Regulated genes 2
Built upon 49 sites [see more]
Predicted regulatory interactions in Pediococcus pentosaceus ATCC 25745
Locus tag Position Score Sequence
Position: -37
Score: 5.7
Sequence: TTAAAATGATTCTAA
Locus tag: PEPE_0043
PEPE_0043 -37 5.7 TTAAAATGATTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pcl2
Ortholog function: Predicted membrane protein
Lactobacillus brevis ATCC 367 LVIS_1881 -98 5.6 TAAGAATTATTCTAA
Lactobacillus fermentum IFO 3956 LAF_1546 -103 5.3 TTAGAATTCTTCTAA
-39 5.7 TTATAATGGTTCTAA
Lactobacillus plantarum WCFS1 lp_3360 -37 5.6 TAATAATGATTATAA
Lactobacillus reuteri JCM 1112 LAR_1418 -102 5.4 TTTTAATGATTCTAA
-38 6 TTATAATGATTCTAA
Lactobacillus sakei subsp. sakei 23K LSA1194 -43 5.6 TTATAATGGTTATAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0409 -38 5.5 TTATAATTTTTCTAA
Pediococcus pentosaceus ATCC 25745 PEPE_0043 -37 5.7 TTAAAATGATTCTAA
Position: -73
Score: 5.3
Sequence: TTAGATTAATTCTAA
Locus tag: PEPE_0502
PEPE_0502 -73 5.3 TTAGATTAATTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cueO
Ortholog function: Predicted copper oxidase
Lactobacillus casei ATCC 334 LSEI_2417 -192 5.3 TTAGATTAATTCTAA
Lactobacillus plantarum WCFS1 lp_0355 -88 5.6 TTAAAATAATTCTAA
Lactobacillus rhamnosus GG LGG_02415 -72 4.8 TTAGATTAATTCCAA
Pediococcus pentosaceus ATCC 25745 PEPE_0502 -73 5.3 TTAGATTAATTCTAA