Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RbsR regulog to Pediococcus pentosaceus ATCC 25745

Reference regulog properties
Source regulog: RbsR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Phylum: Firmicutes
Propagated regulon:
Target genome Pediococcus pentosaceus ATCC 25745
Orthologous TF(s) PEPE_1700
Regulated genes 1
Built upon 18 sites [see more]
Predicted regulatory interactions in Pediococcus pentosaceus ATCC 25745
Locus tag Position Score Sequence
Position: -67
Score: 5.6
Sequence: CTATTAAAACGTTTTCATAA
Locus tag: PEPE_1699
PEPE_1699 -67 5.6 CTATTAAAACGTTTTCATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsK
Ortholog function: Ribokinase (EC 2.7.1.15)
Lactobacillus plantarum WCFS1 lp_3660 -74 6.2 TTATTAAAACGTTTTCATAA
-61 6.1 TTCATAAAACGTTTTAATAA
Lactobacillus rhamnosus GG LGG_00373 -46 6.7 TAAGTAAAACGTTTTACCTA
Pediococcus pentosaceus ATCC 25745 PEPE_1699 -67 5.6 CTATTAAAACGTTTTCATAA
-54 5.3 TTCATAAAACGTTTTAAACA