Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of XylR regulog to Pediococcus pentosaceus ATCC 25745

Reference regulog properties
Source regulog: XylR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor
Biological process: Xylose utilization
Effector: Xylose
Phylum: Firmicutes
Propagated regulon:
Target genome Pediococcus pentosaceus ATCC 25745
Orthologous TF(s) PEPE_0186
Regulated genes 2
Built upon 15 sites [see more]
Predicted regulatory interactions in Pediococcus pentosaceus ATCC 25745
Locus tag Position Score Sequence
Position: -182
Score: 5.1
Sequence: GTTTGTTAGTTCTATTTACAAAC
Locus tag: PEPE_0184
PEPE_0184 -182 5.1 GTTTGTTAGTTCTATTTACAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylS
Ortholog function: Alpha-xylosidase (EC 3.2.1.-)
Lactobacillus brevis ATCC 367 LVIS_0462 -150 5.3 GTTGGTTTAGTAAACCAATTTAC
Pediococcus pentosaceus ATCC 25745 PEPE_0184 -182 5.1 GTTTGTTAGTTCTATTTACAAAC
Position: -66
Score: 5.1
Sequence: GTTTGTAAATAGAACTAACAAAC
Locus tag: PEPE_0185
PEPE_0185 -66 5.1 GTTTGTAAATAGAACTAACAAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: xynT
Ortholog function: Xyloside transporter XynT
Lactobacillus brevis ATCC 367 LVIS_0463 -151 5.3 GTAAATTGGTTTACTAAACCAAC
Pediococcus pentosaceus ATCC 25745 PEPE_0185 -66 5.1 GTTTGTAAATAGAACTAACAAAC