Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LacR regulog to Lactobacillus johnsonii NCC 533

Reference regulog properties
Source regulog: LacR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Lactose utilization
Effector: Lactose
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus johnsonii NCC 533
Orthologous TF(s) LJ0856
Regulated genes 2
Built upon 11 sites [see more]
Predicted regulatory interactions in Lactobacillus johnsonii NCC 533
Locus tag Position Score Sequence
Position: -152
Score: 4.5
Sequence: ATAATTTACTCAAAAAT
Locus tag: LJ0856
LJ0856 -152 4.5 ATAATTTACTCAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacR
Ortholog function: Lactose utilization transcriptional regulator, LacI family
Lactobacillus acidophilus NCFM LBA1465 -65 4.7 GGAATTGAGTAAATATT
Lactobacillus helveticus DPC 4571 lhv_1547 -64 5.3 GGAATTTAGTAAATATT
Lactobacillus johnsonii NCC 533 LJ0856 -152 4.5 ATAATTTACTCAAAAAT
Position: -112
Score: 5.5
Sequence: TATATTTAGTAAATTAT
Locus tag: LJ0857
LJ0857 -112 5.5 TATATTTAGTAAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacS
Ortholog function: Lactose and galactose permease, GPH translocator family
Lactobacillus fermentum IFO 3956 LAF_0779 -112 5.5 AATATTTACTAATTAAC
Lactobacillus johnsonii NCC 533 LJ0857 -112 5.5 TATATTTAGTAAATTAT
Lactobacillus plantarum WCFS1 lp_3468 -108 5.6 GATATTTAGTAATTATT
Lactobacillus reuteri JCM 1112 LAR_1033 -79 5.2 AATATTTACTAAAATTA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1065 -110 5.4 ATCATTTACTAATTTTT