Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of RpiR regulog to Lactobacillus johnsonii FI9785

Reference regulog properties
Source regulog: RpiR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus johnsonii FI9785
Orthologous TF(s) FI9785_1529
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Lactobacillus johnsonii FI9785
Locus tag Position Score Sequence
Position: -113
Score: 5.3
Sequence: TGAAAATTATTTACA
Locus tag: FI9785_1529
FI9785_1529 -113 5.3 TGAAAATTATTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpiR
Ortholog function: Predicted sugar utilization transcriptional regulator, RpiR family
Lactobacillus acidophilus NCFM LBA1172 -107 5.9 TGAAAATTAATTTCA
Lactobacillus casei ATCC 334 LSEI_2316 -154 5.7 TGAAATTATATTTCA
Lactobacillus helveticus DPC 4571 lhv_1519 -118 5.1 TGAAAATAAGTTACA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1438 -104 5.6 AGAAATTAATTTTCA
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