Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PerR regulog to Lactobacillus salivarius subsp. salivarius UCC118

Reference regulog properties
Source regulog: PerR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Manganese homeostasis; Oxidative stress response; Iron homeostasis
Effector: Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus salivarius subsp. salivarius UCC118
Orthologous TF(s) LSL_1450, LSL_1367
Regulated genes 4
Built upon 49 sites [see more]
Predicted regulatory interactions in Lactobacillus salivarius subsp. salivarius UCC118
Locus tag Position Score Sequence
Position: -93
Score: 5.5
Sequence: TTATAATTTTTCTAA
Locus tag: LSL_0169
LSL_0169 -93 5.5 TTATAATTTTTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cadA
Ortholog function: Predicted cation-transporting ATP-ase
Lactobacillus brevis ATCC 367 LVIS_0392 -52 4.6 CAATAATTGTTATAA
Lactobacillus casei ATCC 334 LSEI_2799 -80 5 TTATATTCGTTCTAA
-46 5.2 TTGTAATGGTTATAA
Lactobacillus plantarum WCFS1 lp_3327 -93 5.4 TTAGAATCATTCTTA
Lactobacillus rhamnosus GG LGG_02803 -80 5 TTATATTCGTTCTAA
-46 5.2 TTGTAATGGTTATAA
Lactobacillus sakei subsp. sakei 23K LSA0969 -65 5.3 TGATAATAATTCTAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0169 -93 5.5 TTATAATTTTTCTAA
Position: -33
Score: 4.8
Sequence: TTATAAAAGTTATAA
Locus tag: LSL_1367
LSL_1367 -33 4.8 TTATAAAAGTTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: Peroxide stress response transcriptional regulator PerR, Fur family
Lactobacillus brevis ATCC 367 LVIS_1882 -186 5.5 TTAGAATAATTCTTA
Lactobacillus fermentum IFO 3956 LAF_1362 -27 5.6 TTAAAATGATTATAA
Lactobacillus plantarum WCFS1 lp_3247 -79 5 TAGTAATGTTTCTAA
-63 4.8 TTGGAATCCTTCTAA
Lactobacillus reuteri JCM 1112 LAR_1232 -107 5.3 TTAGAATAATTATTA
-31 5.5 TTATAATTATTTTAA
Lactobacillus sakei subsp. sakei 23K LSA0466 -38 4.7 TGATAATGATTATCA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1367 -33 4.8 TTATAAAAGTTATAA
Position: -64
Score: 4.6
Sequence: TTACAAAAATTCTAA
Locus tag: LSL_1578
LSL_1578 -64 4.6 TTACAAAAATTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycnB
Ortholog function: Predicted permease
Lactobacillus brevis ATCC 367 LVIS_1917 -39 5.2 TAAGAATATTTCTAA
Lactobacillus casei ATCC 334 LSEI_2416 -192 5.3 TTAGATTAATTCTAA
Lactobacillus fermentum IFO 3956 LAF_1361 -109 5.3 TTATAATCATTTTAA
-30 4.8 TTATAAGTTTTCTAA
Lactobacillus reuteri JCM 1112 LAR_1231 -107 5.4 TTAAAATAATTATAA
-31 5.6 TAATAATTATTCTAA
Lactobacillus rhamnosus GG LGG_02414 -72 4.8 TTAGATTAATTCCAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1578 -64 4.6 TTACAAAAATTCTAA
Pediococcus pentosaceus ATCC 25745 PEPE_0503 -73 5.3 TTAGATTAATTCTAA
Position: -38
Score: 5.5
Sequence: TTATAATTTTTCTAA
Locus tag: LSL_1684
LSL_1684 -38 5.5 TTATAATTTTTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybbL
Ortholog function: Predicted ABC transporter, ATP-binding protein
Lactobacillus plantarum WCFS1 lp_3225 -36 6 TTATAATGATTCTAA
Lactobacillus rhamnosus GG LGG_02565 -35 5 TTAGAATGGTTACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1684 -38 5.5 TTATAATTTTTCTAA
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