Propagation of Rex regulog to Lactobacillus plantarum WCFS1
| Source regulog: | Rex - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus plantarum WCFS1 |
| Orthologous TF(s) | lp_0725 |
| Regulated genes | 5 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -205
Score: 4.9 Sequence: TTGTGAATATTATAACAG
Position: -45
Score: 5 Sequence: TTGTGAAATAAGAAACAA
Locus tag: lp_0329
|
||||
| lp_0329 | -205 | 4.9 | TTGTGAATATTATAACAG | |
| -45 | 5 | TTGTGAAATAAGAAACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1901 | -99 | 5.4 | TTGTGAATTAATTCACGA |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0146 | -156 | 4.6 | ATGTGATTTATTATACAA |
| -35 | 4.7 | TTGTTAATAAATGAGCAA | ||
| Oenococcus oeni PSU-1 | OEOE_1248 | -107 | 4.6 | TAGTGATTTTTTTTACAA |
| -49 | 5.6 | TTGTTAATAAGTTCACAA | ||
|
Position: -116
Score: 5 Sequence: TTGTGAAAAATATAATTA
Locus tag: lp_3051
|
||||
| lp_3051 | -116 | 5 | TTGTGAAAAATATAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dhaT | ||||
| Ortholog function: 1,3-propanediol dehydrogenase (EC 1.1.1.202) | ||||
| Lactobacillus plantarum WCFS1 | lp_3051 | -116 | 5 | TTGTGAAAAATATAATTA |
| Lactobacillus reuteri JCM 1112 | LAR_0029 | -164 | 5.2 | TTGTGAATATTATGACAA |
| Lactobacillus sakei subsp. sakei 23K | LSA0122 | -35 | 5.3 | TTGTGAAATAATTCAGAA |
|
Position: -36
Score: 5 Sequence: TTGTGAATATAAACACAT
Locus tag: lp_3449
|
||||
| lp_3449 | -36 | 5 | TTGTGAATATAAACACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: noxE | ||||
| Ortholog function: NADH oxidase (EC 1.6.99.3) | ||||
| Lactobacillus plantarum WCFS1 | lp_3449 | -36 | 5 | TTGTGAATATAAACACAT |
| Lactobacillus reuteri JCM 1112 | LAR_0064 | -245 | 5.1 | TTGTGAGTAATTTTACAA |
| -35 | 4.6 | TTGTGAAAATCAGAACAT | ||
|
Position: -43
Score: 5.5 Sequence: TTGTAAATTAATTCACAA
Locus tag: lp_3662
|
||||
| lp_3662 | -43 | 5.5 | TTGTAAATTAATTCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Lactobacillus acidophilus NCFM | LBA0461 | -45 | 5.5 | TTGTAAATTAGTTCACAA |
| Lactobacillus brevis ATCC 367 | LVIS_0119 | -105 | 5 | TTGTGATTTTTTTAACAT |
| -47 | 4.8 | TCGTGAAGAAGTTAACAA | ||
| Lactobacillus casei ATCC 334 | LSEI_0775 | -106 | 5 | TCGTGAAAAAATTCACCA |
| -85 | 4.7 | TTGTTTACAAAATCACAA | ||
| -49 | 5.4 | TTGTGAAATGGTTAACAA | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1581 | -47 | 5.2 | TTGAGAAATTGATCACAA |
| Lactobacillus fermentum IFO 3956 | LAF_0277 | -151 | 4.9 | TTGAAATTTAATTCACAA |
| -85 | 4.5 | TTGTTGACTAAATCACAA | ||
| Lactobacillus johnsonii NCC 533 | LJ1766 | -289 | 4.8 | TTATTAAAATTTTAACAT |
| -191 | 5.3 | TTGTGAAATATTTTTCAA | ||
| -104 | 5 | TTGTAAAAAGATGCACAA | ||
| Lactobacillus plantarum WCFS1 | lp_3662 | -43 | 5.5 | TTGTAAATTAATTCACAA |
| Lactobacillus reuteri JCM 1112 | LAR_0310 | -238 | 4.4 | TTGTGAAATAGACTTCAA |
| -104 | 5.1 | TTGTTTAAATGTTCACAA | ||
| Lactobacillus rhamnosus GG | LGG_00757 | -105 | 5.2 | TCGTGAAAAAGTTCACTA |
| -84 | 4.7 | TTGTTTACAAAATCACAA | ||
| -48 | 5.4 | TTGTGAAATGGTTAACAA | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0379 | -99 | 5.1 | CTGTTAAAAAAATCACAA |
| -42 | 5.2 | TTGTTAATTAAATCACAT | ||