Propagation of Rex regulog to Lactobacillus brevis ATCC 367
| Source regulog: | Rex - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus brevis ATCC 367 |
| Orthologous TF(s) | LVIS_0616 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -105
Score: 5 Sequence: TTGTGATTTTTTTAACAT
Position: -47
Score: 4.8 Sequence: TCGTGAAGAAGTTAACAA
Locus tag: LVIS_0119
|
||||
| LVIS_0119 | -105 | 5 | TTGTGATTTTTTTAACAT | |
| -47 | 4.8 | TCGTGAAGAAGTTAACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Lactobacillus acidophilus NCFM | LBA0461 | -45 | 5.5 | TTGTAAATTAGTTCACAA |
| Lactobacillus brevis ATCC 367 | LVIS_0119 | -105 | 5 | TTGTGATTTTTTTAACAT |
| -47 | 4.8 | TCGTGAAGAAGTTAACAA | ||
| Lactobacillus casei ATCC 334 | LSEI_0775 | -106 | 5 | TCGTGAAAAAATTCACCA |
| -85 | 4.7 | TTGTTTACAAAATCACAA | ||
| -49 | 5.4 | TTGTGAAATGGTTAACAA | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1581 | -47 | 5.2 | TTGAGAAATTGATCACAA |
| Lactobacillus fermentum IFO 3956 | LAF_0277 | -151 | 4.9 | TTGAAATTTAATTCACAA |
| -85 | 4.5 | TTGTTGACTAAATCACAA | ||
| Lactobacillus johnsonii NCC 533 | LJ1766 | -289 | 4.8 | TTATTAAAATTTTAACAT |
| -191 | 5.3 | TTGTGAAATATTTTTCAA | ||
| -104 | 5 | TTGTAAAAAGATGCACAA | ||
| Lactobacillus plantarum WCFS1 | lp_3662 | -43 | 5.5 | TTGTAAATTAATTCACAA |
| Lactobacillus reuteri JCM 1112 | LAR_0310 | -238 | 4.4 | TTGTGAAATAGACTTCAA |
| -104 | 5.1 | TTGTTTAAATGTTCACAA | ||
| Lactobacillus rhamnosus GG | LGG_00757 | -105 | 5.2 | TCGTGAAAAAGTTCACTA |
| -84 | 4.7 | TTGTTTACAAAATCACAA | ||
| -48 | 5.4 | TTGTGAAATGGTTAACAA | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0379 | -99 | 5.1 | CTGTTAAAAAAATCACAA |
| -42 | 5.2 | TTGTTAATTAAATCACAT | ||
|
Position: -137
Score: 4.4 Sequence: TTGCAAATTCTTTCACAA
Locus tag: LVIS_0616
|
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| LVIS_0616 | -137 | 4.4 | TTGCAAATTCTTTCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rex | ||||
| Ortholog function: Redox-sensitive transcriptional regulator Rex | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0616 | -137 | 4.4 | TTGCAAATTCTTTCACAA |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1498 | -141 | 4.9 | TTGTGAAAAAGTTCAATA |
| Lactobacillus reuteri JCM 1112 | LAR_0341 | -157 | 4.7 | TTGTATTTTAGTTCACAA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1214 | -33 | 5 | ATGTTAAATATTTCACGA |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_1774 | -39 | 4.9 | TTATGCAAAAGTTCACAA |
|
Position: -36
Score: 5.2 Sequence: TTGTGAATATTATATCAA
Locus tag: LVIS_0911
|
||||
| LVIS_0911 | -36 | 5.2 | TTGTGAATATTATATCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhB2 | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0911 | -36 | 5.2 | TTGTGAATATTATATCAA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1748 | -64 | 5.1 | TTGAGAAAGAATTCACAA |
|
Position: -79
Score: 4.8 Sequence: TTGTGCAAAATTTCACTT
Locus tag: LVIS_1019
|
||||
| LVIS_1019 | -79 | 4.8 | TTGTGCAAAATTTCACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhB1 | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Zn-dependent | ||||
| Lactobacillus brevis ATCC 367 | LVIS_1019 | -79 | 4.8 | TTGTGCAAAATTTCACTT |
| Lactobacillus sakei subsp. sakei 23K | LSA1702 | -73 | 5.3 | TTGTGAAAAAAATCATAA |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_1919 | -36 | 5.2 | TTGTAAATAAGTTCACAT |
| Oenococcus oeni PSU-1 | OEOE_0527 | -176 | 4.9 | TTGTAAATTTTTGTACAA |
|
Position: -44
Score: 5.4 Sequence: TTGTGAAAATTATCTCAA
Locus tag: LVIS_1558
|
||||
| LVIS_1558 | -44 | 5.4 | TTGTGAAAATTATCTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: noxE | ||||
| Ortholog function: NADH oxidase (EC 1.6.99.3) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_1558 | -44 | 5.4 | TTGTGAAAATTATCTCAA |
| Lactobacillus casei ATCC 334 | LSEI_0285 | -109 | 5 | TTAATAAATATTTCACAA |
| -40 | 5 | TTGTGAAAAGGTTATCAA | ||
| Lactobacillus rhamnosus GG | LGG_00325 | -41 | 5.3 | TTGTGAAATTTTTATCAA |
| Lactobacillus sakei subsp. sakei 23K | LSA0802 | -193 | 4.7 | TTTATAATAAAATCACAA |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_2067 | -114 | 4.6 | TCGTGTTAAATATCACAA |
|
Position: -37
Score: 5.3 Sequence: TTGTGAAAATAATCACGA
Locus tag: LVIS_2165
|
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| LVIS_2165 | -37 | 5.3 | TTGTGAAAATAATCACGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gldA | ||||
| Ortholog function: Glycerol dehydrogenase (EC 1.1.1.6) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_2165 | -37 | 5.3 | TTGTGAAAATAATCACGA |
| Lactobacillus fermentum IFO 3956 | LAF_0639 | -39 | 5 | TTGTTAAAACATACACAA |
| Lactobacillus reuteri JCM 1112 | LAR_1724 | -38 | 4.8 | TTGTTAACTTATACACAA |