Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Lactobacillus salivarius subsp. salivarius UCC118

Reference regulog properties
Source regulog: Zur - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus salivarius subsp. salivarius UCC118
Orthologous TF(s) LSL_1450
Regulated genes 3
Built upon 43 sites [see more]
Predicted regulatory interactions in Lactobacillus salivarius subsp. salivarius UCC118
Locus tag Position Score Sequence
Position: -35
Score: 6.6
Sequence: TAGAAAGTAAAGATTACTATTTA
Locus tag: LSL_1450
LSL_1450 -35 6.6 TAGAAAGTAAAGATTACTATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zur
Ortholog function: Zinc homeostasis transcriptional regulator Zur, Fur family
Lactobacillus casei ATCC 334 LSEI_2025 -69 6.5 TTAATCGTAATCAATACGATTTA
Lactobacillus fermentum IFO 3956 LAF_1665 -37 5.8 AAAAACGTAATCATTACTAAAAA
Lactobacillus plantarum WCFS1 lp_0868 -56 6.9 TAAATAGTAATGATTATGATTTA
Lactobacillus rhamnosus GG LGG_02012 -70 5.4 CTAATCGTAACCAGTACGATTTG
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1450 -35 6.6 TAGAAAGTAAAGATTACTATTTA
Oenococcus oeni PSU-1 OEOE_1189 -95 5.4 TTAATGGTAAATATTACTTTTAC
-53 6 TACTTAGTAATGATTACTTGTTA
Pediococcus pentosaceus ATCC 25745 PEPE_0386 -36 7.3 TAAAACGTAATGATTACTATTTA
Position: -40
Score: 7
Sequence: TAAAAAGTAATGATTACTATATA
Locus tag: LSL_1587
LSL_1587 -40 7 TAAAAAGTAATGATTACTATATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, substrate-binding protein
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1587 -40 7 TAAAAAGTAATGATTACTATATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0803 -171 6.2 TTTAAAGTAATCATTACTTTTTG
-142 6.2 TTAATAGTAATGATTACTATAAT
Oenococcus oeni PSU-1 OEOE_1188 -118 6 TAACAAGTAATCATTACTAAGTA
-76 5.5 GTAAAAGTAATATTTACCATTAA
Position: -63
Score: 5.7
Sequence: TAAATCGTAATTGATATCATTTA
Position: -42
Score: 7.3
Sequence: TAAAAAGTAATGATTACTATTTA
Locus tag: LSL_1944
LSL_1944 -63 5.7 TAAATCGTAATTGATATCATTTA
-42 7.3 TAAAAAGTAATGATTACTATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpsN2
Ortholog function: Small subunit ribosomal protein S14, zinc-independent
Lactobacillus brevis ATCC 367 LVIS_0360 -37 5.9 TAAAGCGTAATAATTACTATCAA
Lactobacillus casei ATCC 334 LSEI_2425 -248 6.9 TAAATAGTAATGATTACGAATTA
Lactobacillus fermentum IFO 3956 LAF_1127 -82 6.5 TAAATGGTAATAATTACTATTTG
Lactobacillus plantarum WCFS1 lp_2216 -125 5.6 AAAATAGTAGCTGTTACGATTTA
Lactobacillus rhamnosus GG LGG_02422 -243 6.8 TTAAGCGTAATGATTACGATTTA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1944 -63 5.7 TAAATCGTAATTGATATCATTTA
-42 7.3 TAAAAAGTAATGATTACTATTTA
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