Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CcpA regulog to Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842

Reference regulog properties
Source regulog: CcpA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-bisphosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Orthologous TF(s) Ldb1593
Regulated genes 9
Built upon 561 sites [see more]
Predicted regulatory interactions in Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Locus tag Position Score Sequence
Position: -119
Score: 4.7
Sequence: ATAAAAGCGCATTCAT
Locus tag: Ldb0067
Ldb0067 -119 4.7 ATAAAAGCGCATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF2
Ortholog function: Glycerol uptake facilitator protein
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0058 -132 4.7 ATAAAAGCGCATTCAT
Lactobacillus plantarum WCFS1 lp_3436 -104 4.3 TAGAAACCGCTTATTT
-82 4.6 AATAAAGCGTTTACAT
Lactobacillus sakei subsp. sakei 23K LSA1170 -95 4.1 ATAAAAGGGCTTTAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1392 -292 3.9 TTTCAAGCGCTTCAAT
Oenococcus oeni PSU-1 OEOE_0349 -104 4.3 TAGAAACCGCTTATTT
-82 4.5 AATAAAACGTTTACAT
Position: 13
Score: 3.9
Sequence: ATGTAACCATTTACGA
Locus tag: Ldb1593
Ldb1593 13 3.9 ATGTAACCATTTACGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccpA
Ortholog function: Carbon catabolism global transcriptional regulator CcpA, LacI family
Lactobacillus acidophilus NCFM LBA0431 -75 4.4 CTGTAAACGTTTGCAA
Lactobacillus brevis ATCC 367 LVIS_1203 -107 4.7 TCGAAAACGTTTTCAA
-49 4.1 TTGAAAACGGATGAAA
Lactobacillus casei ATCC 334 LSEI_0809 -94 4 AGTAAAACGCTTGCAT
Lactobacillus helveticus DPC 4571 lhv_0457 -76 4.3 ATGTAAACGTTTGCAC
Lactobacillus johnsonii NCC 533 LJ0491 -74 4 TCGTAAACGGTTGCAA
Lactobacillus plantarum WCFS1 lp_2256 -121 5.2 ATGAAAGCGATTTCAA
-51 4 ATGAAAACGGATGAAA
Lactobacillus rhamnosus GG LGG_00793 -95 4 AGTAAAACGCTTGCAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0544 -114 4.4 ATGAAAACACTTATAA
-92 4.9 TTGTAAGCGTTTGCAA
Oenococcus oeni PSU-1 OEOE_0684 -59 4.6 ATGTAATCGCTTGCAT
Pediococcus pentosaceus ATCC 25745 PEPE_1250 -69 4.6 TTGATAACGTATTCAT
Position: -89
Score: 4
Sequence: GTGCAATCGCTTACAG
Locus tag: Ldb1594
Ldb1594 -89 4 GTGCAATCGCTTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: pepQ
Ortholog function: Xaa-Pro dipeptidase (EC 3.4.13.9)
Lactobacillus acidophilus NCFM LBA0430 -85 4.6 TTGCAAACGTTTACAG
Lactobacillus brevis ATCC 367 LVIS_1204 -103 4.9 TTGAAAACGTTTTCGA
Lactobacillus casei ATCC 334 LSEI_0808 -229 4.2 ATGCAAGCGTTTTACT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1474 -89 4 GTGCAATCGCTTACAG
Lactobacillus helveticus DPC 4571 lhv_0456 -86 4.6 GTGCAAACGTTTACAT
Lactobacillus johnsonii NCC 533 LJ0490 -85 4.2 TTGCAACCGTTTACGA
Lactobacillus plantarum WCFS1 lp_2258 -158 5.2 TTGAAATCGCTTTCAT
Lactobacillus sakei subsp. sakei 23K LSA0414 -120 4.1 ATGCAAGCGGTTTACA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0419 -125 4 TTGCAAGCGTTTCATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0543 -124 4.9 TTGCAAACGCTTACAA
-102 4.2 TTATAAGTGTTTTCAT
Pediococcus pentosaceus ATCC 25745 PEPE_1251 -109 4.6 ATGAATACGTTATCAA
Position: -38
Score: 4
Sequence: GAGAAAGCCTTTACAA
Locus tag: Ldb2042
Ldb2042 -38 4 GAGAAAGCCTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruR
Ortholog function: Fructose utilization transcriptional regulator FruR, DeoR family
Lactobacillus acidophilus NCFM LBA1779 -37 4.2 GAGAAAGCGAATACAA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1889 -164 4 GAGAAAGCCTTTACAA
Lactobacillus helveticus DPC 4571 lhv_1846 12 4.3 GAGAAAGCGGATACAA
Lactobacillus johnsonii NCC 533 LJ0570 -40 4.1 CTGAAAGCGTTTATCA
Lactobacillus plantarum WCFS1 lp_2095 -6 4.3 TTGAAAGTGCTTACAG
Lactobacillus sakei subsp. sakei 23K LSA1048 -130 4 ATGAAAACCTTTACAC
-40 4.3 TTGTAAACGATGACAT
Pediococcus pentosaceus ATCC 25745 PEPE_1166 -6 4.3 ATGAAAGTGCTTACAG
Position: -76
Score: 4
Sequence: TTGATAGCACTTGCAA
Locus tag: Ldb2213
Ldb2213 -76 4 TTGATAGCACTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: spxB
Ortholog function: Pyruvate oxidase (EC 1.2.3.3)
Lactobacillus acidophilus NCFM LBA1974 -110 4.4 GAAAAAGCGGTTTCAT
-78 4 AAGATAGCGTTTTGAA
Lactobacillus brevis ATCC 367 LVIS_0313 -152 4.3 TTGAAAGCGTGAACAA
Lactobacillus casei ATCC 334 LSEI_1784 -149 4 GTTTAAGCGTTTTATA
-92 4.4 ATGAAAGGGCTTGCAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_2034 -76 4 TTGATAGCACTTGCAA
Lactobacillus johnsonii NCC 533 LJ1853 -79 4.1 CAGCAACCGCTTTCAA
Lactobacillus plantarum WCFS1 lp_0849 -390 4.3 ATGTAAGCGTCATCAT
-86 4.9 ATAAAAGCGTTTACAT
Lactobacillus rhamnosus GG LGG_01836 -136 4.6 ATTAAAGCGCTTTCCT
-89 4.1 GTGAAAGGGTTTGCAT
Lactobacillus sakei subsp. sakei 23K LSA1830 -71 4.1 TTTGTAACGCTTACAA
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