Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LJ1265 regulog to Lactobacillus johnsonii NCC 533

Reference regulog properties
Source regulog: LJ1265 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Pentose utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus johnsonii NCC 533
Orthologous TF(s) LJ1265
Regulated genes 2
Built upon 4 sites [see more]
Predicted regulatory interactions in Lactobacillus johnsonii NCC 533
Locus tag Position Score Sequence
Position: -108
Score: 6.6
Sequence: TCTTGTAAATGCTTACAAAA
Locus tag: LJ1265
LJ1265 -108 6.6 TCTTGTAAATGCTTACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: LJ1265
Ortholog function: Predicted pentose utilization transcriptional regulator, LacI family
Lactobacillus acidophilus NCFM LBA1488 -103 6.4 ACTTGTAATTGCTTACAAAA
Lactobacillus johnsonii NCC 533 LJ1265 -108 6.6 TCTTGTAAATGCTTACAAAA
Position: -45
Score: 6.6
Sequence: TTTTGTAAGCATTTACAAGA
Locus tag: LJ1266
LJ1266 -45 6.6 TTTTGTAAGCATTTACAAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: LJ1266
Ortholog function: Transketolase, N-terminal section (EC 2.2.1.1)
Lactobacillus acidophilus NCFM LBA1489 -46 6.4 TTTTGTAAGCAATTACAAGT
Lactobacillus johnsonii NCC 533 LJ1266 -45 6.6 TTTTGTAAGCATTTACAAGA
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