Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Reference regulog properties
Source regulog: CcpA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-bisphosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Orthologous TF(s) LEUM_0544
Regulated genes 31
Built upon 561 sites [see more]
Predicted regulatory interactions in Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Locus tag Position Score Sequence
Position: -83
Score: 5
Sequence: ATGAAAGCGTATACAA
Locus tag: LEUM_0130
LEUM_0130 -83 5 ATGAAAGCGTATACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylA
Ortholog function: Xylose isomerase (EC 5.3.1.5)
Lactobacillus brevis ATCC 367 LVIS_0183 -91 3.9 GCGAAAACGCTTGCAT
Lactobacillus fermentum IFO 3956 LAF_0402 -217 4.3 TGGGAAGCGGTTTCTA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0130 -83 5 ATGAAAGCGTATACAA
Pediococcus pentosaceus ATCC 25745 PEPE_0187 -150 4.2 TTGTAAGCGAATACAC
-129 4.4 ATGTCAACGCTTTTAT
-107 4.7 TTGAAAACGCTTTACA
Position: -136
Score: 4.8
Sequence: ATGAAAGCGTTGTCAT
Position: -78
Score: 5.3
Sequence: TTGAAAGCGGTTACAA
Position: -47
Score: 4.5
Sequence: ATGGAAACGGTTCCAA
Locus tag: LEUM_0288
LEUM_0288 -136 4.8 ATGAAAGCGTTGTCAT
-78 5.3 TTGAAAGCGGTTACAA
-47 4.5 ATGGAAACGGTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrA
Ortholog function: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
Lactobacillus acidophilus NCFM LBA0401 -219 4.7 ATGTAAGCGTTATCTT
-30 4.9 ATAAAAGCGTTTACAT
Lactobacillus fermentum IFO 3956 LAF_1578 -126 4.4 TTGGCAGCGATTTCAA
-57 4.5 AGAAAAGCGCTTACAA
Lactobacillus johnsonii NCC 533 LJ0519 -214 4.6 ATGTAAACGCATTCTT
-37 4.4 TTTAAAACGCTTACAC
Lactobacillus plantarum WCFS1 lp_0185 -212 4.3 ATAAAACCGCTTACAC
-157 4 ATGTCAGCGTTTCAAA
-58 4.1 TGTAAAGCGCTTGCAT
Lactobacillus sakei subsp. sakei 23K LSA1792 -183 4.2 ATGTAAACGTTTGATA
-54 4.5 TGAAAAGCGTTTACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0066 -52 4.2 CATTAAGCGTTTTCAA
Pediococcus pentosaceus ATCC 25745 PEPE_0518 -212 4.3 ATAAAACCGCTTACAC
-157 4 ATGTCAGCGTTTCAAA
-58 4.1 TGTAAAGCGCTTGCAT
Position: -37
Score: 5
Sequence: TTGTAACCGATTTCAT
Locus tag: LEUM_0355
LEUM_0355 -37 5 TTGTAACCGATTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgi
Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Lactobacillus acidophilus NCFM LBA0752 -90 4.3 GTGAATGCGCTTATAA
Lactobacillus casei ATCC 334 LSEI_1126 -62 4 ATGAAACCACTCTCAT
Lactobacillus fermentum IFO 3956 LAF_1686 -63 4.4 GAGTTAGCGCTTTCAT
Lactobacillus fermentum IFO 3956 LAF_0411 -66 4.2 ATGGAAACGTTATCGT
Lactobacillus helveticus DPC 4571 lhv_0795 -14 4 TAGGAAGCGGATTTAT
Lactobacillus plantarum WCFS1 lp_2502 -77 3.8 GAGGAAGCGCTTTTCA
Lactobacillus reuteri JCM 1112 LAR_0415 -69 4.4 TTGAAACCGACTTCAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0355 -37 5 TTGTAACCGATTTCAT
Oenococcus oeni PSU-1 OEOE_0636 -118 3.9 TTGGAAGCTATTCCAA
Position: -137
Score: 4.1
Sequence: ATGATAATGTTTTCAT
Position: -54
Score: 4.4
Sequence: GTGGAACCGGTTACAA
Locus tag: LEUM_0383
LEUM_0383 -137 4.1 ATGATAATGTTTTCAT
-54 4.4 GTGGAACCGGTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrT
Ortholog function: Predicted sucrose permease
Lactobacillus reuteri JCM 1112 LAR_1453 -190 4 AAAATAGCGTTATCAT
-133 4 ATGTAATGGATTACAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0383 -137 4.1 ATGATAATGTTTTCAT
-54 4.4 GTGGAACCGGTTACAA
Position: -76
Score: 5.1
Sequence: TTGGAAGCGTTTACAA
Locus tag: LEUM_0499
LEUM_0499 -76 5.1 TTGGAAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: LVIS_0438
Ortholog function: Hypothetical protein
Lactobacillus brevis ATCC 367 LVIS_0438 -97 4.2 ATGAAAGCGTTTGACA
-75 4.3 AGGAAAACGTTTACCA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0499 -76 5.1 TTGGAAGCGTTTACAA
Position: -86
Score: 5.1
Sequence: TTGTAACCGTTTACAT
Locus tag: LEUM_0507
LEUM_0507 -86 5.1 TTGTAACCGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: treP
Ortholog function: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69)
Lactobacillus acidophilus NCFM LBA1012 -96 4.3 TTGTGATCGCTTTCAA
-29 4.8 ATGAAAACGCTTTATA
Lactobacillus casei ATCC 334 LSEI_0631 -90 4.2 TTAAAAGCGTTTAAAC
-27 4.3 GTGAAAGCGATTTCTG
Lactobacillus johnsonii NCC 533 LJ0760 -104 4.4 AAGTAAGCTTTTTCAT
-36 4.5 ATGAAAGCGGATACTT
Lactobacillus plantarum WCFS1 lp_3240 -118 4.8 AAGAAAGCGCTTTTAT
Lactobacillus plantarum WCFS1 lp_0264 -29 4.7 ATGAAAACGATAACAA
Lactobacillus rhamnosus GG LGG_00603 -27 4.3 GTGAAAACGGTTACTG
Lactobacillus sakei subsp. sakei 23K LSA1200 -105 4.4 TTGTAAACGGTTCAAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1512 -96 4.5 TTGTAAACAATTTCAT
-27 4.1 AAGAAAAGGTTTTCAG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0507 -86 5.1 TTGTAACCGTTTACAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0508 -86 5.1 TTGTAACCGTTTACAT
Oenococcus oeni PSU-1 OEOE_1342 -96 4.5 TTGAAAACGCTTTATG
Oenococcus oeni PSU-1 OEOE_1341 -96 4.5 TTGAAAACGCTTTATG
Pediococcus pentosaceus ATCC 25745 PEPE_1804 -199 4.6 TTAGAAACGCTTACAT
-56 4.7 TAGCAAGCGCTTACAA
Position: -124
Score: 4.9
Sequence: TTGCAAACGCTTACAA
Position: -102
Score: 4.2
Sequence: TTATAAGTGTTTTCAT
Locus tag: LEUM_0543
LEUM_0543 -124 4.9 TTGCAAACGCTTACAA
-102 4.2 TTATAAGTGTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pepQ
Ortholog function: Xaa-Pro dipeptidase (EC 3.4.13.9)
Lactobacillus acidophilus NCFM LBA0430 -85 4.6 TTGCAAACGTTTACAG
Lactobacillus brevis ATCC 367 LVIS_1204 -103 4.9 TTGAAAACGTTTTCGA
Lactobacillus casei ATCC 334 LSEI_0808 -229 4.2 ATGCAAGCGTTTTACT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1474 -89 4 GTGCAATCGCTTACAG
Lactobacillus helveticus DPC 4571 lhv_0456 -86 4.6 GTGCAAACGTTTACAT
Lactobacillus johnsonii NCC 533 LJ0490 -85 4.2 TTGCAACCGTTTACGA
Lactobacillus plantarum WCFS1 lp_2258 -158 5.2 TTGAAATCGCTTTCAT
Lactobacillus sakei subsp. sakei 23K LSA0414 -120 4.1 ATGCAAGCGGTTTACA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0419 -125 4 TTGCAAGCGTTTCATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0543 -124 4.9 TTGCAAACGCTTACAA
-102 4.2 TTATAAGTGTTTTCAT
Pediococcus pentosaceus ATCC 25745 PEPE_1251 -109 4.6 ATGAATACGTTATCAA
Position: -114
Score: 4.4
Sequence: ATGAAAACACTTATAA
Position: -92
Score: 4.9
Sequence: TTGTAAGCGTTTGCAA
Locus tag: LEUM_0544
LEUM_0544 -114 4.4 ATGAAAACACTTATAA
-92 4.9 TTGTAAGCGTTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccpA
Ortholog function: Carbon catabolism global transcriptional regulator CcpA, LacI family
Lactobacillus acidophilus NCFM LBA0431 -75 4.4 CTGTAAACGTTTGCAA
Lactobacillus brevis ATCC 367 LVIS_1203 -107 4.7 TCGAAAACGTTTTCAA
-49 4.1 TTGAAAACGGATGAAA
Lactobacillus casei ATCC 334 LSEI_0809 -94 4 AGTAAAACGCTTGCAT
Lactobacillus helveticus DPC 4571 lhv_0457 -76 4.3 ATGTAAACGTTTGCAC
Lactobacillus johnsonii NCC 533 LJ0491 -74 4 TCGTAAACGGTTGCAA
Lactobacillus plantarum WCFS1 lp_2256 -121 5.2 ATGAAAGCGATTTCAA
-51 4 ATGAAAACGGATGAAA
Lactobacillus rhamnosus GG LGG_00793 -95 4 AGTAAAACGCTTGCAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0544 -114 4.4 ATGAAAACACTTATAA
-92 4.9 TTGTAAGCGTTTGCAA
Oenococcus oeni PSU-1 OEOE_0684 -59 4.6 ATGTAATCGCTTGCAT
Pediococcus pentosaceus ATCC 25745 PEPE_1250 -69 4.6 TTGATAACGTATTCAT
Position: -31
Score: 4.9
Sequence: GTGTAAGCGGTTACAA
Locus tag: LEUM_0736
LEUM_0736 -31 4.9 GTGTAAGCGGTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lplA1
Ortholog function: Lipoate-protein ligase A
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0736 -31 4.9 GTGTAAGCGGTTACAA
Oenococcus oeni PSU-1 OEOE_0327 -53 5.1 TTGAAAGCGCTTACAG
Pediococcus pentosaceus ATCC 25745 PEPE_1774 -107 4 TTTAAAACATTTTAAA
-40 4.8 TAGAAAGCGCTTCCAT
Position: -76
Score: 5.1
Sequence: ATGGAAGCGTTTTCAA
Locus tag: LEUM_0795
LEUM_0795 -76 5.1 ATGGAAGCGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsR
Ortholog function: Ribose operon transcriptional regulator, LacI family
Lactobacillus casei ATCC 334 LSEI_0306 -88 4.5 TTGACAGCGCTTCCAA
Lactobacillus rhamnosus GG LGG_00372 -89 4.5 TTGACAGCGCTTCCAT
Lactobacillus sakei subsp. sakei 23K LSA0203 -114 4.3 TGTAAACCGTTTTCAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0795 -76 5.1 ATGGAAGCGTTTTCAA
Oenococcus oeni PSU-1 OEOE_0146 -45 4.6 TTGTAAACGTTTTAAG
Pediococcus pentosaceus ATCC 25745 PEPE_1700 -140 4.2 ATATAAGCGTTTAATT
Position: -92
Score: 4.3
Sequence: AAGTAAACGTTTACTG
Position: -60
Score: 4.2
Sequence: TTGTAAACGTTTACGC
Locus tag: LEUM_0828
LEUM_0828 -92 4.3 AAGTAAACGTTTACTG
-60 4.2 TTGTAAACGTTTACGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nplT
Ortholog function: Neopullulanase (EC 3.2.1.135)
Lactobacillus brevis ATCC 367 LVIS_2180 -38 4.9 TTGAAAACGGTTACTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0828 -92 4.3 AAGTAAACGTTTACTG
-60 4.2 TTGTAAACGTTTACGC
Oenococcus oeni PSU-1 OEOE_0040 -124 4.2 CAGTAAACGTTTACTA
-92 4.6 TTGTAAACGTTTACTG
-57 4.9 TTGTAAACGTTTACTT
Position: -104
Score: 5
Sequence: TTGTAAGCGTTTCCAA
Locus tag: LEUM_0852
LEUM_0852 -104 5 TTGTAAGCGTTTCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araA
Ortholog function: L-arabinose isomerase (EC 5.3.1.4)
Lactobacillus brevis ATCC 367 LVIS_1740 -79 4.4 TTGAAAGGGCTTTCGA
Lactobacillus fermentum IFO 3956 LAF_1554 -100 4.3 TGGTAAGCGTTTTATA
-76 4.4 GTGAAATCGCTTACAG
Lactobacillus plantarum WCFS1 lp_3554 -63 4.6 TTGAAAGGGCTTTCTA
Lactobacillus reuteri JCM 1112 LAR_0470 -63 4.7 ATGAAAGCGCGTTCAT
Lactobacillus sakei subsp. sakei 23K LSA1856 -78 4.7 TTGAAACCGTTTTATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0852 -104 5 TTGTAAGCGTTTCCAA
Pediococcus pentosaceus ATCC 25745 PEPE_0165 -48 4.9 ATGAATACGCTTTCAA
Position: -53
Score: 5.1
Sequence: ATGAAAGCGCTTACTA
Locus tag: LEUM_0880
LEUM_0880 -53 5.1 ATGAAAGCGCTTACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacS
Ortholog function: Lactose and galactose permease
Lactobacillus johnsonii NCC 533 LJ0260 -70 4.2 TATAAAGCGTATACAT
-36 4.8 TTGAAAGCGAATACAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0880 -53 5.1 ATGAAAGCGCTTACTA
Pediococcus pentosaceus ATCC 25745 PEPE_0512 -46 4.7 ATGAAAACGGATACAA
Position: -77
Score: 4.7
Sequence: AAGTAACCGTTTACAT
Locus tag: LEUM_0882
LEUM_0882 -77 4.7 AAGTAACCGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: melA
Ortholog function: Alpha-galactosidase (EC 3.2.1.22)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0882 -77 4.7 AAGTAACCGTTTACAT
Position: -41
Score: 5
Sequence: ATGTAAACGGTTACAA
Locus tag: LEUM_0893
LEUM_0893 -41 5 ATGTAAACGGTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malT
Ortholog function: Predicted maltose/maltodextrin permease
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0994 -140 4.6 ATATAAACGGTTACAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0893 -41 5 ATGTAAACGGTTACAA
Position: -72
Score: 4.8
Sequence: ATGTAAGCGGTTACTT
Locus tag: LEUM_0898
LEUM_0898 -72 4.8 ATGTAAGCGGTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: malT2
Ortholog function: Predicted maltose/maltodextrin permease
Lactobacillus reuteri JCM 1112 LAR_1508 -89 4.2 GTGCAAGCGGTTGCAA
-52 4.6 ATGTAAGCGTAATCAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0898 -72 4.8 ATGTAAGCGGTTACTT
Position: -49
Score: 5
Sequence: ATGTAAGCGCTTACTT
Locus tag: LEUM_0927
LEUM_0927 -49 5 ATGTAAGCGCTTACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bglA
Ortholog function: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Lactobacillus brevis ATCC 367 LVIS_0465 61 4.2 TTGAAGGCGCTTACGA
Position: -45
Score: 5.4
Sequence: ATGAAAGCGCTTACAA
Locus tag: LEUM_0977
LEUM_0977 -45 5.4 ATGAAAGCGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: spxB
Ortholog function: Pyruvate oxidase (EC 1.2.3.3)
Lactobacillus plantarum WCFS1 lp_3589 -77 4.3 ATGTAAGCGTTTGCTG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0977 -45 5.4 ATGAAAGCGCTTACAA
Position: -140
Score: 4.6
Sequence: ATATAAACGGTTACAT
Locus tag: LEUM_0994
LEUM_0994 -140 4.6 ATATAAACGGTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: malT
Ortholog function: Predicted maltose/maltodextrin permease
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0994 -140 4.6 ATATAAACGGTTACAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0893 -41 5 ATGTAAACGGTTACAA
Position: -80
Score: 4.5
Sequence: CTGTAAGCGCTTCCAT
Locus tag: LEUM_1064
LEUM_1064 -80 4.5 CTGTAAGCGCTTCCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacZ
Ortholog function: Beta-galactosidase (EC 3.2.1.23)
Lactobacillus fermentum IFO 3956 LAF_0780 -92 4.2 TCGTAATCGGTTTCAT
Lactobacillus plantarum WCFS1 lp_3469 -177 4.2 AATAATACGCTTTCAT
-66 4.6 ATGAAAGCGCTTATCA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1064 -80 4.5 CTGTAAGCGCTTCCAT
Position: -52
Score: 5.1
Sequence: TAGTAAGCGCTTACAT
Locus tag: LEUM_1245
LEUM_1245 -52 5.1 TAGTAAGCGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xynT
Ortholog function: Na+/xyloside symporter
Lactobacillus brevis ATCC 367 LVIS_0463 -202 4.7 ATGTCAACGCTTTCAT
-115 4.2 GTGTAAGCGGTTGCAG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1245 -52 5.1 TAGTAAGCGCTTACAT
Pediococcus pentosaceus ATCC 25745 PEPE_0185 -150 4.2 TTGTAAGCGAATACAC
-129 4.4 ATGTCAACGCTTTTAT
-107 4.7 TTGAAAACGCTTTACA
Position: -85
Score: 5
Sequence: ATGCAAGCGCTTACAT
Locus tag: LEUM_1273
LEUM_1273 -85 5 ATGCAAGCGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fmpA
Ortholog function: Predicted mannose specific PTS system, IIA component
Lactobacillus casei ATCC 334 LSEI_0559 -200 4.5 TTGTAAGCGTTAACCT
Lactobacillus johnsonii NCC 533 LJ1656 -82 4.2 CAGTAAACGATTACAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1273 -85 5 ATGCAAGCGCTTACAT
Oenococcus oeni PSU-1 OEOE_1204 -186 4.6 ATGAATTCGTTTTCAA
Position: -66
Score: 5.3
Sequence: TTGTAAACGCTTACAT
Locus tag: LEUM_1314
LEUM_1314 -66 5.3 TTGTAAACGCTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacS
Ortholog function: Lactose and galactose permease, GPH translocator family
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1314 -66 5.3 TTGTAAACGCTTACAT
Position: -77
Score: 4.8
Sequence: AGGTAAGCGTTTACAT
Locus tag: LEUM_1316
LEUM_1316 -77 4.8 AGGTAAGCGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: LEUM_1316
Ortholog function: Beta-galactosidase (EC 3.2.1.23)
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1316 -77 4.8 AGGTAAGCGTTTACAT
Position: -62
Score: 4.5
Sequence: TTGTGAACGTTTTCAT
Locus tag: LEUM_1571
LEUM_1571 -62 4.5 TTGTGAACGTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndk
Ortholog function: Nucleoside diphosphate kinase (EC 2.7.4.6)
Lactobacillus casei ATCC 334 LSEI_0748 -108 4 ATGAAAACGATGAAAA
Lactobacillus plantarum WCFS1 lp_0242 -37 4.8 ATGATACCGCTTTCAA
Lactobacillus reuteri JCM 1112 LAR_0192 -74 4.6 CTAAAAACGCTTTCAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1571 -62 4.5 TTGTGAACGTTTTCAT
Position: -100
Score: 4.7
Sequence: ATGTAAACGGTAACAA
Position: -75
Score: 5.4
Sequence: TTGAAAGCGTTTACAA
Locus tag: LEUM_1768
LEUM_1768 -100 4.7 ATGTAAACGGTAACAA
-75 5.4 TTGAAAGCGTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: manL
Ortholog function: Mannose-specific PTS system, IIAB component (EC 2.7.1.69)
Lactobacillus acidophilus NCFM LBA0452 -42 4.5 ATAAAAGCGGATTCAT
Lactobacillus fermentum IFO 3956 LAF_0391 -140 4.7 TAGTAAGCGTTTACAG
Lactobacillus helveticus DPC 4571 lhv_0480 -42 4.5 ATAAAAGCGGATTCAT
Lactobacillus johnsonii NCC 533 LJ0503 -106 4.4 ATGCAAGCATTTTCAA
-68 4.1 AAGCAAACGTATACAT
Lactobacillus plantarum WCFS1 lp_0575 1 4 TGGTAAGCATTATCAT
Lactobacillus sakei subsp. sakei 23K LSA0449 -136 4.2 AGTAAAGCGTTTTAAA
-57 4.6 TTGTTAGCGTTTTTAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0086 -109 4.3 TAGAAATCGTTTACAC
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0654 -131 4.3 TAGTAAGTGTTTTCAA
-61 4.1 ATGAAAAGGCTTTATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1768 -100 4.7 ATGTAAACGGTAACAA
-75 5.4 TTGAAAGCGTTTACAA
Pediococcus pentosaceus ATCC 25745 PEPE_1518 -146 4.5 TTGAAAGCGTTTTTTG
Position: -157
Score: 5.3
Sequence: ATGTAAACGTTTTCAT
Position: -63
Score: 4.7
Sequence: TTGTAAGCGCTTTGAT
Locus tag: LEUM_1780
LEUM_1780 -157 5.3 ATGTAAACGTTTTCAT
-63 4.7 TTGTAAGCGCTTTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptsH
Ortholog function: Phosphotransferase system, HPr-related protein
Lactobacillus acidophilus NCFM LBA0639 -111 4.4 ATGTAAACTGTTACAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0512 -108 4.7 ATGAAAACATTTACAA
Lactobacillus helveticus DPC 4571 lhv_0686 -109 4.4 ATGTAAGCTATTACAT
Lactobacillus johnsonii NCC 533 LJ0816 -109 4.6 ATGTAAACATTTACAT
Lactobacillus plantarum WCFS1 lp_1273 -135 4 ATGAAAGGGCTTGTAT
Lactobacillus reuteri JCM 1112 LAR_1256 -102 4 TATTTAACGCTTACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0388 -91 4.1 TTGTTATCGTTTGCAT
-68 4.2 ATGTAAACGTGTTCTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1780 -157 5.3 ATGTAAACGTTTTCAT
-63 4.7 TTGTAAGCGCTTTGAT
Pediococcus pentosaceus ATCC 25745 PEPE_0609 -127 4 ATGTAAGGGCTTGCTT
Position: -16
Score: 3.8
Sequence: AAGAAAGAGGTTAAAA
Locus tag: LEUM_1919
LEUM_1919 -16 3.8 AAGAAAGAGGTTAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhA
Ortholog function: Alcohol dehydrogenase, Zn-dependent (EC 1.1.1.1)
Lactobacillus brevis ATCC 367 LVIS_0254 -90 4.2 ATGTAAGCGCTTACGC
Lactobacillus sakei subsp. sakei 23K LSA1702 -39 4.8 ATGGAAACGATTTCAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1919 -16 3.8 AAGAAAGAGGTTAAAA
Oenococcus oeni PSU-1 OEOE_0527 -229 4.2 AAGTAAGCGCTTCCAC
Position: -53
Score: 4.9
Sequence: ATGTAAGCGCATACAT
Position: -19
Score: 4.1
Sequence: TAGAAAGGGTTTAAAT
Locus tag: LEUM_1998
LEUM_1998 -53 4.9 ATGTAAGCGCATACAT
-19 4.1 TAGAAAGGGTTTAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ulaG
Ortholog function: Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G)
Lactobacillus casei ATCC 334 LSEI_2739 -69 4.2 TTGTAAGCGTATCCAG
Lactobacillus rhamnosus GG LGG_02733 -68 4.7 TTGTAAGCGCAATCAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1998 -53 4.9 ATGTAAGCGCATACAT
-19 4.1 TAGAAAGGGTTTAAAT
Position: 29
Score: 4.4
Sequence: GAGAAAACGCTTAAAA
Locus tag: LEUM_2039
LEUM_2039 29 4.4 GAGAAAACGCTTAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: LEUM_2039
Ortholog function: Predicted transcriptional regulator of FeS culster biosynthesis, XRE family
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_2039 29 4.4 GAGAAAACGCTTAAAA
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