Propagation of PurR regulog to Lactobacillus reuteri 100-23
| Source regulog: | PurR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | PurR |
| Regulation mode: | repressor |
| Biological process: | Purine metabolism |
| Effector: | 5-phosphoribosyl 1-pyrophosphate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus reuteri 100-23 |
| Orthologous TF(s) | Lreu23DRAFT_0130 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: 7
Score: 5.6 Sequence: AAACACGAACAAT
Locus tag: Lreu23DRAFT_0638
|
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| Lreu23DRAFT_0638 | 7 | 5.6 | AAACACGAACAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pbuO | ||||
| Ortholog function: Guanine/hypoxanthine permease | ||||
| Lactobacillus sakei subsp. sakei 23K | LSA0087 | -101 | 5.4 | AAACACGAACTAT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0381 | -88 | 5.1 | ATAAACGAACATT |
|
Position: -134
Score: 4.1 Sequence: TTATCCGAACAAT
Position: -92
Score: 4.2 Sequence: AAAATCGAACTTA
Locus tag: Lreu23DRAFT_0438
|
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| Lreu23DRAFT_0438 | -134 | 4.1 | TTATCCGAACAAT | |
| -92 | 4.2 | AAAATCGAACTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fhs | ||||
| Ortholog function: Formate--tetrahydrofolate ligase (EC 6.3.4.3) | ||||
| Lactobacillus acidophilus NCFM | LBA1562 | -59 | 4.4 | ATATAAGAACAAT |
| Lactobacillus helveticus DPC 4571 | lhv_1535 | -73 | 4.1 | AAATACAAACAAA |
|
Position: -102
Score: 4.9 Sequence: ATACACGAACTAT
Locus tag: Lreu23DRAFT_0441
|
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| Lreu23DRAFT_0441 | -102 | 4.9 | ATACACGAACTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purE | ||||
| Ortholog function: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) | ||||
| Lactobacillus acidophilus NCFM | LBA1561 | -59 | 4.4 | ATATAAGAACAAT |
| Lactobacillus casei ATCC 334 | LSEI_1756 | -107 | 5.3 | AAACACGAACGAT |
| Lactobacillus fermentum IFO 3956 | LAF_0118 | -106 | 5.2 | AAATCCGAACAAT |
| Lactobacillus helveticus DPC 4571 | lhv_1534 | -73 | 4.1 | AAATACAAACAAA |
| Lactobacillus plantarum WCFS1 | lp_2729 | -104 | 5 | TAACACGAACATT |
| Lactobacillus reuteri JCM 1112 | LAR_0128 | -102 | 4.9 | ATACACGAACTAT |
| Lactobacillus rhamnosus GG | LGG_01814 | -108 | 5.5 | AAATACGAACATT |
| -96 | 4.3 | TAAAACGAATAAT | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0652 | -112 | 4.3 | TAACACGTACAAT |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0515 | -68 | 4.1 | AAATTCGAATTTT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0718 | -137 | 4.1 | ATATACGAACTCT |
| Oenococcus oeni PSU-1 | OEOE_1138 | -130 | 4.6 | AAACACGAAATAT |
| -79 | 5.3 | AAAAACGAACGTT | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1467 | -123 | 5.4 | AAAAACGAACTTT |
|
Position: -194
Score: 4.7 Sequence: AAAGCCGAACGTT
Position: -64
Score: 5 Sequence: AAAGCCGAACATT
Locus tag: Lreu23DRAFT_0130
|
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| Lreu23DRAFT_0130 | -194 | 4.7 | AAAGCCGAACGTT | |
| -64 | 5 | AAAGCCGAACATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purR | ||||
| Ortholog function: Purine metabolism transcriptional regulator PurR, PurR family | ||||
| Lactobacillus acidophilus NCFM | LBA0218 | -27 | 4.8 | AAAACCAAACATT |
| Lactobacillus brevis ATCC 367 | LVIS_0474 | -91 | 5.3 | AAACCCGAACAAT |
| Lactobacillus casei ATCC 334 | LSEI_2587 | -126 | 4.8 | AAATGCGAACGTT |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_0302 | -54 | 4.3 | AAAAACAGACATT |
| Lactobacillus fermentum IFO 3956 | LAF_0194 | -98 | 5.2 | AAAGACGAACAAT |
| Lactobacillus helveticus DPC 4571 | lhv_0234 | -27 | 4.1 | AAAGCCAAACGTT |
| Lactobacillus johnsonii NCC 533 | LJ0207 | -105 | 4.1 | TATTACGAACAAT |
| Lactobacillus plantarum WCFS1 | lp_0466 | 12 | 4.3 | AGAAGCGAACGTT |
| Lactobacillus reuteri JCM 1112 | LAR_0210 | -64 | 5.2 | AAATCCGAACATT |
| Lactobacillus rhamnosus GG | LGG_02564 | -126 | 4.8 | AAATGCGAACGTT |
| Lactobacillus sakei subsp. sakei 23K | LSA1651 | -120 | 5.6 | AAAAACGAACAAT |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0315 | -116 | 5.4 | AAAAACGAACTTT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0292 | -103 | 5.2 | AAATCCGAACATT |