Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NiaR regulog to Lactobacillus rhamnosus HN001

Reference regulog properties
Source regulog: NiaR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: NiaR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: Niacin
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus rhamnosus HN001
Orthologous TF(s) LRH_00382
Regulated genes 1
Built upon 7 sites [see more]
Predicted regulatory interactions in Lactobacillus rhamnosus HN001
Locus tag Position Score Sequence
Position: -51
Score: 5.6
Sequence: TTAGGGTGTCAAGACACCTAAT
Locus tag: LRH_11524
LRH_11524 -51 5.6 TTAGGGTGTCAAGACACCTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: niaP
Ortholog function: Niacin transporter NiaP
Lactobacillus casei ATCC 334 LSEI_2277 -45 5 CTAGGGTGTCAAGACACCCTAA
Lactobacillus rhamnosus GG LGG_02281 -51 5.6 TTAGGGTGTCAAGACACCTAAT
Lactobacillus sakei subsp. sakei 23K LSA1529 -76 5.9 TTAAGGTGTGTTGACACCTGTA
Pediococcus pentosaceus ATCC 25745 PEPE_0213 -112 5.6 TACAAGTGTCAAGACATTAATT
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