Propagation of CtsR regulog to Oenococcus oeni PSU-1
| Source regulog: | CtsR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CtsR |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Oenococcus oeni PSU-1 |
| Orthologous TF(s) | OEOE_0513 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -96
Score: 6.5 Sequence: TTTTATTTGACCTTTCTTGACTTT
Locus tag: OEOE_0289
|
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| OEOE_0289 | -96 | 6.5 | TTTTATTTGACCTTTCTTGACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hsp | ||||
| Ortholog function: Small heat shock protein | ||||
| Oenococcus oeni PSU-1 | OEOE_0289 | -96 | 6.5 | TTTTATTTGACCTTTCTTGACTTT |
|
Position: -79
Score: 6 Sequence: GAATCTCTGACCATTATTGACTAT
Locus tag: OEOE_0640
|
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| OEOE_0640 | -79 | 6 | GAATCTCTGACCATTATTGACTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpE | ||||
| Ortholog function: ATP-dependent Clp protease, ATP-binding subunit ClpE | ||||
| Lactobacillus brevis ATCC 367 | LVIS_1554 | -84 | 0.6 | ATGGTCAAGAAAGGTCAAGCCTTT |
| Lactobacillus casei ATCC 334 | LSEI_1762 | -198 | 0.1 | TAGGTCAAGAAAGGTCAAACCTTT |
| Lactobacillus fermentum IFO 3956 | LAF_1388 | -48 | -0.7 | ATGGTCAAGAAAAGTCAAAGGTTG |
| Lactobacillus plantarum WCFS1 | lp_1269 | -93 | -2.3 | AAGGTCAACAAAGGTCAAAGAGCC |
| Lactobacillus reuteri JCM 1112 | LAR_1257 | -59 | 0.2 | ATGGTCAAGAAAGGTCAAAACATT |
| Lactobacillus rhamnosus GG | LGG_01823 | -69 | 0.1 | TAGGTCAAGAAAGGTCAAACCTTT |
| Lactobacillus sakei subsp. sakei 23K | LSA1465 | -66 | -1.8 | AAGGTCAAAGATAGTCAAACAAAC |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0386 | -57 | -1.6 | AAGGTCAAAGTTGGTCAAAATAAC |
| Oenococcus oeni PSU-1 | OEOE_0640 | -27 | -1.3 | AAGGTCAATAAAGGTCAAACATTG |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0607 | -223 | -1.5 | ATGGTCAATATTGGTCAAACATCA |
|
Position: -71
Score: 6.5 Sequence: AAATGTTTGACCAATCTTGACTAT
Locus tag: OEOE_1310
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| OEOE_1310 | -71 | 6.5 | AAATGTTTGACCAATCTTGACTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: grpE | ||||
| Ortholog function: Heat shock protein GrpE | ||||
| Lactobacillus fermentum IFO 3956 | LAF_0750 | -89 | 6.4 | AGATCTTTGACTTTTGTTGACTTT |
| Lactobacillus plantarum WCFS1 | lp_2028 | -91 | 5.9 | AATACTTTGTCTTTCCTTGACTTT |
| Lactobacillus reuteri JCM 1112 | LAR_0678 | -101 | 6.5 | AATTGTTTGACGTTTCTTGACTTT |
| Lactobacillus sakei subsp. sakei 23K | LSA1237 | -87 | 5.3 | CAATTCTTGACTTTATTTGACGTT |
| Oenococcus oeni PSU-1 | OEOE_1310 | -71 | 6.5 | AAATGTTTGACCAATCTTGACTAT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0895 | -107 | 6 | AGATGTCTGACCAAATTTGACTAT |
|
Position: -72
Score: 6.7 Sequence: AAAAGTTTGACCTTTTTTGACCAA
Locus tag: OEOE_1397
|
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| OEOE_1397 | -72 | 6.7 | AAAAGTTTGACCTTTTTTGACCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: groS | ||||
| Ortholog function: Heat shock protein 60 family co-chaperone GroES | ||||
| Lactobacillus fermentum IFO 3956 | LAF_0325 | -153 | -0.6 | TTGGTCAAAATTAGTCAAAGTTTT |
| Lactobacillus reuteri JCM 1112 | LAR_0342 | -128 | -1.1 | ATGGTCAAAAAAAGTCAAAGTGTT |
| Oenococcus oeni PSU-1 | OEOE_1397 | -72 | 6.7 | AAAAGTTTGACCTTTTTTGACCAA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0420 | -128 | -0.9 | TTGGTTAATAAAGGTCAAAAATAC |