Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Zur regulog to Lactobacillus brevis ATCC 367

Reference regulog properties
Source regulog: Zur - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus brevis ATCC 367
Orthologous TF(s) LVIS_1778
Regulated genes 3
Built upon 43 sites [see more]
Predicted regulatory interactions in Lactobacillus brevis ATCC 367
Locus tag Position Score Sequence
Position: -37
Score: 5.9
Sequence: TAAAGCGTAATAATTACTATCAA
Locus tag: LVIS_0360
LVIS_0360 -37 5.9 TAAAGCGTAATAATTACTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpsN2
Ortholog function: Small subunit ribosomal protein S14, zinc-independent
Lactobacillus brevis ATCC 367 LVIS_0360 -37 5.9 TAAAGCGTAATAATTACTATCAA
Lactobacillus casei ATCC 334 LSEI_2425 -248 6.9 TAAATAGTAATGATTACGAATTA
Lactobacillus fermentum IFO 3956 LAF_1127 -82 6.5 TAAATGGTAATAATTACTATTTG
Lactobacillus plantarum WCFS1 lp_2216 -125 5.6 AAAATAGTAGCTGTTACGATTTA
Lactobacillus rhamnosus GG LGG_02422 -243 6.8 TTAAGCGTAATGATTACGATTTA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1944 -63 5.7 TAAATCGTAATTGATATCATTTA
-42 7.3 TAAAAAGTAATGATTACTATTTA
Position: -46
Score: 6.6
Sequence: TAAACGGTAATCATTACTGTTTA
Locus tag: LVIS_0470
LVIS_0470 -46 6.6 TAAACGGTAATCATTACTGTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, substrate-binding protein
Lactobacillus brevis ATCC 367 LVIS_0470 -46 6.6 TAAACGGTAATCATTACTGTTTA
Lactobacillus plantarum WCFS1 lp_3302 -44 6.6 TTAACAGTAATGGTTACGATTTA
Lactobacillus sakei subsp. sakei 23K LSA0282 -37 6.5 TAAAGCGTAACTATTACGATTTA
Position: -41
Score: 6.8
Sequence: TAAATAGTAATAATTACCATTTA
Locus tag: LVIS_0566
LVIS_0566 -41 6.8 TAAATAGTAATAATTACCATTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: znuA
Ortholog function: Zinc ABC transporter, substrate-binding protein
Lactobacillus brevis ATCC 367 LVIS_0566 -41 6.8 TAAATAGTAATAATTACCATTTA
Lactobacillus plantarum WCFS1 lp_3018 -88 6.8 TAAAACGTAAATATTACTATTTA
-39 7.3 TAAAACGTAATGATTACTATTTA
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