Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NiaR regulog to Lactobacillus plantarum JDM1

Reference regulog properties
Source regulog: NiaR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: NiaR
Regulation mode: repressor
Biological process: NAD biosynthesis
Effector: Niacin
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus plantarum JDM1
Orthologous TF(s) JDM1_2223
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Lactobacillus plantarum JDM1
Locus tag Position Score Sequence
Position: -121
Score: 6
Sequence: TTTAGGTGTCTTGACACCTATG
Locus tag: JDM1_2223
JDM1_2223 -121 6 TTTAGGTGTCTTGACACCTATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: niaR
Ortholog function: NAD biosynthesis transcription regulator, HTH_11 family
Lactobacillus plantarum WCFS1 lp_2770 -121 5.8 TTTAGATGTCTTGACACCTATG
Pediococcus pentosaceus ATCC 25745 PEPE_0214 -64 5.6 AATTAATGTCTTGACACTTGTA
Position: -46
Score: 6
Sequence: CATAGGTGTCAAGACACCTAAA
Locus tag: JDM1_2224
JDM1_2224 -46 6 CATAGGTGTCAAGACACCTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pncB
Ortholog function: Nicotinate phosphoribosyltransferase (EC 2.4.2.11)
Lactobacillus plantarum WCFS1 lp_2771 -46 5.8 CATAGGTGTCAAGACATCTAAA
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